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Nitrosococcus oceani ATCC 19707 (noce0)
Gene : ABA59041.1
DDBJ      :             HflK-like protein
Swiss-Prot:             

Homologs  Archaea  8/68 : Bacteria  501/915 : Eukaryota  1/199 : Viruses  0/175   --->[See Alignment]
d.43.2
:413 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:RPS:PDB   158->301 3bk6C PDBj 3e-18 24.1 %
:RPS:SCOP  121->269 1winA  d.43.2.1 * 7e-17 14.6 %
:HMM:SCOP  158->271 1winA_ d.43.2.1 * 1.8e-20 33.3 %
:RPS:PFM   1->45 PF12221 * HflK_N 6e-11 60.5 %
:RPS:PFM   91->279 PF01145 * Band_7 1e-13 36.1 %
:HMM:PFM   90->281 PF01145 * Band_7 5.1e-34 32.2 174/179  
:HMM:PFM   1->53 PF12221 * HflK_N 1.8e-20 71.4 42/42  
:BLT:SWISS 29->377 HFLK_VIBCH 5e-66 53.1 %
:TM
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID ABA59041.1 GT:GENE ABA59041.1 GT:PRODUCT HflK-like protein GT:DATABASE GIB00281CH01 GT:ORG noce0 GB:ACCESSION GIB00281CH01 GB:LOCATION complement(2941464..2942705) GB:FROM 2941464 GB:TO 2942705 GB:DIRECTION - GB:PRODUCT HflK-like protein GB:PROTEIN_ID ABA59041.1 GB:DB_XREF GI:76884360 InterPro:IPR001107 InterPro:IPR010201 LENGTH 413 SQ:AASEQ MAWNEPNGNKDKDPWNKEGDQWGKDGDRQGPPDLDEVIRNLKAKLSGLFGGKGGGGPGGGRPTLGRGGSILGLALLVLVLAVAWGLSGIYIVAPAERGVVLRFGEYVATTEPGPHWHIPYPIEKVELVDVAQIRSYEIGYRSTGRGQAGSPVPTEALMLTQDENIVDVRIAVQYRVKDAANYLFNVRNADTNLRQVVESALREAVGKSKMDFVLTEGRSDIVLRTEELAQQVLDQYHAGLIITSVNMQDAQPPEQVQAAFADAIKAREDQQRLRNEAEAYANDIIPRARGAAFRKVQEAEAYKSEVVALAGGETARFEQVLKEYLDAPEITEKRLYLETMETVMERSRKVLVDVPEGTNVFYLPLDRMVNEGNPKEQRLISLDRLSSFNSETSASEEQRRQNSNDDSRSRRGR GT:EXON 1|1-413:0| BL:SWS:NREP 1 BL:SWS:REP 29->377|HFLK_VIBCH|5e-66|53.1|326/395| TM:NTM 1 TM:REGION 69->91| SEG 47->68|glfggkggggpgggrptlgrgg| SEG 71->88|lglallvlvlavawglsg| SEG 398->411|qrrqnsnddsrsrr| RP:PDB:NREP 1 RP:PDB:REP 158->301|3bk6C|3e-18|24.1|137/160| RP:PFM:NREP 2 RP:PFM:REP 1->45|PF12221|6e-11|60.5|43/52|HflK_N| RP:PFM:REP 91->279|PF01145|1e-13|36.1|169/183|Band_7| HM:PFM:NREP 2 HM:PFM:REP 90->281|PF01145|5.1e-34|32.2|174/179|Band_7| HM:PFM:REP 1->53|PF12221|1.8e-20|71.4|42/42|HflK_N| RP:SCP:NREP 1 RP:SCP:REP 121->269|1winA|7e-17|14.6|130/143|d.43.2.1| HM:SCP:REP 158->271|1winA_|1.8e-20|33.3|111/0|d.43.2.1|1/1|Band 7/SPFH domain| OP:NHOMO 562 OP:NHOMOORG 510 OP:PATTERN ----------------------------------1------------11-----1-1111-------- ----------------------------------------------1-----1111-1-----------11-----------1-1---------11----------------------------------------------------------------------------------1------1--111-1-111111111111111-1----111---1-----------------------------------11---------111------------------------------------------1--------111-111111122121-1111111111--1---------111----11------1--211111111111111111111111111111-111111113111222222222212131111112222211-------------2111111111111111111111111111111111111-1111111111111111111111111111111111111111111111111112111121-------111111-11112121112211---1---1111-11--2-------------------------111111111111211111111111111111111-2111111-11111111111111111111-111111111111111111111111111111111111111111111111111111111111111111111-----111131111111111111111111----------111111111111111111111111111111111111111112111111111111111111-------1111111111--------------------------1322232333--- --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1---------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 141 STR:RPRED 34.1 SQ:SECSTR #############################################################################################################################################################EEcTTccEEEEEEEEEEEEccHHHHHHccccHHHHHHHHHHHHHHHHHHHccHHHHHHc#HHHHHHHHHHHHHHHTGGG##TEEEEEEEEEEEEccTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc################################################################################################################ DISOP:02AL 5-34, 46-67, 348-349, 365-413| PSIPRED cccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHcccccccccccccccccccccHHHHHHHHHHHHHHHHHcccEEEcccEEEEEEEccEEEEEEccccEEEEcccccEEEEEEEEEEEEEEcccccccccccccccccccEEEEcccEEEEEEEEEEEEEccHHHHHHHcccHHHHHHHHHHHHHHHHHccccHHHHHcccHHHHHHHHHHHHHHHHHHccccEEEEEEEEEEccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccEEEEcccccEEEEEEcHHHHcccccccccccccccccccccccccccccccccccccccccccc //