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Nitrosococcus oceani ATCC 19707 (noce0)
Gene : ABA59054.1
DDBJ      :             hypothetical protein
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  39/915 : Eukaryota  0/199 : Viruses  0/175   --->[See Alignment]
f.4.3
:443 amino acids
:PSIPRED
:DISOPRED
:HMM:SCOP  36->443 2porA_ f.4.3.1 * 9.4e-33 21.6 %
:HMM:PFM   353->400 PF01280 * Ribosomal_L19e 0.00083 22.9 48/148  
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID ABA59054.1 GT:GENE ABA59054.1 GT:PRODUCT hypothetical protein GT:DATABASE GIB00281CH01 GT:ORG noce0 GB:ACCESSION GIB00281CH01 GB:LOCATION complement(2954247..2955578) GB:FROM 2954247 GB:TO 2955578 GB:DIRECTION - GB:PRODUCT hypothetical protein GB:PROTEIN_ID ABA59054.1 GB:DB_XREF GI:76884373 LENGTH 443 SQ:AASEQ MNNFKKTKLAVAAAAAMGLSLPAGAVVVVGGENGWEVSFDGNINQFYVWTDPDARPGGVVGGNMNFADEKSSRFRTGLMPALFSFNVKAPTWNGLDIGGRVSFAGQTNNANTKNSDLGVNGGFGDSGIGKVRSDSTSDFGGNLEFREAFFTVDGAFGQVLLGRTLSLFMGKNILTDQTLFGVGATGSVHGGGFTLGRIGYGYLYPNFNSQVRWTSPDMMGFKVSLAAVDPSKVCGEGAVFASGANCATETNSPRGEGEISYAGTFNNGSYQVWGSGMYQNVKRQSVGGGFGDDDFSVWGWTAGTQVQFMGFEVNGSYYDGEGLGTSFLMDADSLDATGQKRDNKGWLVQGGYTILGHTKVAASYGRSEADETSNDRSCRTGGGSCVGAGGARLEEQNSYVVGIYHDVNANLKLVAEYSRVENEWHGGQEQKANVVGVGGYFFW GT:EXON 1|1-443:0| SEG 9->31|lavaaaaamglslpagavvvvgg| SEG 180->194|fgvgatgsvhgggft| SEG 285->300|svgggfgdddfsvwgw| SEG 381->390|gggscvgagg| HM:PFM:NREP 1 HM:PFM:REP 353->400|PF01280|0.00083|22.9|48/148|Ribosomal_L19e| HM:SCP:REP 36->443|2porA_|9.4e-33|21.6|296/0|f.4.3.1|1/1|Porins| OP:NHOMO 46 OP:NHOMOORG 39 OP:PATTERN -------------------------------------------------------------------- -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------22--------------------------------------------------------------11111111-1111-----------------------------------1----------------------------------------1--------------111--------------1-----------------1---231-----------------------------------------2-1--------------------2---11----------------------------------------------------------------------------------------------------------------------------------------1111-1--1111-1---------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- DISOP:02AL 1-6| PSIPRED ccccHHHHHEEEHHHHccccccccEEEEEEccccEEEEEccEEEEEEEEcccccccccEEEcccccccccccEEEEEcccHHHccccccccccccEEEEEEEEEcccccccccccEEEccccccccccccccccccccccccEEEEEEEEEEEccEEEEEEccEEEEEHHHHHHHHHHHHHcccccccccccEEEEccEEcEEcccccccEEEEcccccccEEEEEEEccccccccccccccccccccccccccccEEEEEEEEEccEEEEEEEEEEEEEEEEEEEcccccccEEEEEEEEEEEEEEEccEEEEEEEEEEEcccHHHccccccccccccEEccccEEEEEEEEEccEEEEEEEEccEEEcccccccccccccccEEcccccEEEEEEEEEEEEEEEcccEEEEEEEEEEEEEEccccccccccEEEEEEEEEc //