[GTOP] [HELP] [ORGANISMS] [SEARCH] [SUMMARY]
Nitrosococcus oceani ATCC 19707 (noce0)
Gene : ABA59067.1
DDBJ      :             ADP-glyceromanno-heptose 6-epimerase precursor
Swiss-Prot:HLDD_NITOC   RecName: Full=ADP-L-glycero-D-manno-heptose-6-epimerase;         EC=5.1.3.20;AltName: Full=ADP-L-glycero-beta-D-manno-heptose-6-epimerase;         Short=ADP-glyceromanno-heptose 6-epimerase;         Short=ADP-hep 6-epimerase;         Short=AGME;

Homologs  Archaea  40/68 : Bacteria  526/915 : Eukaryota  28/199 : Viruses  1/175   --->[See Alignment]
c.2.1
:317 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   1->312 1eq2D PDBj e-109 66.3 %
:RPS:PDB   2->316 1e7rA PDBj 4e-24 15.1 %
:RPS:SCOP  2->311 1sb8A  c.2.1.2 * 5e-36 22.8 %
:HMM:SCOP  1->312 1eq2A_ c.2.1.2 * 9.7e-66 30.6 %
:RPS:PFM   2->239 PF01370 * Epimerase 2e-12 36.0 %
:HMM:PFM   2->242 PF01370 * Epimerase 1.2e-44 31.2 224/238  
:BLT:SWISS 1->317 HLDD_NITOC 0.0 100.0 %

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID ABA59067.1 GT:GENE ABA59067.1 GT:PRODUCT ADP-glyceromanno-heptose 6-epimerase precursor GT:DATABASE GIB00281CH01 GT:ORG noce0 GB:ACCESSION GIB00281CH01 GB:LOCATION 2969582..2970535 GB:FROM 2969582 GB:TO 2970535 GB:DIRECTION + GB:PRODUCT ADP-glyceromanno-heptose 6-epimerase precursor GB:PROTEIN_ID ABA59067.1 GB:DB_XREF GI:76884386 InterPro:IPR000205 InterPro:IPR000834 InterPro:IPR001509 InterPro:IPR002225 InterPro:IPR005913 InterPro:IPR011912 LENGTH 317 SQ:AASEQ MIIVTGGAGFIGSNIIKALNQGGREDILVVDDLTQGEKFSNLIDCEIWDYWDKQPFLQAIKAGEEFPHPVDAFIHQGACSATTEWNGRYMMENNFYYSKRLLHYCLERRIPFLYASSAAVYGCGLTFQEHREFEAPRNVYGYSKWLFDQYVRRYLPTASSQIVGLRYFNIYGPREAHKGAMASVAYHAHCQLKETGRIKLFEGCDGYEHGEQRRDFVSVADAAAVNLWFLEHPNQSGIFNVGTGQAQTFNEVAQAVLAFHGHGEIEYIPFPDHLRGRYQSFTQADIHALREAGYAEPFALVEKGVKTYLDWLGKNQD GT:EXON 1|1-317:0| SW:ID HLDD_NITOC SW:DE RecName: Full=ADP-L-glycero-D-manno-heptose-6-epimerase; EC=5.1.3.20;AltName: Full=ADP-L-glycero-beta-D-manno-heptose-6-epimerase; Short=ADP-glyceromanno-heptose 6-epimerase; Short=ADP-hep 6-epimerase; Short=AGME; SW:GN Name=hldD; OrderedLocusNames=Noc_2614; SW:KW Carbohydrate metabolism; Complete proteome; Isomerase; NADP. SW:EXACT T SW:FUNC + BL:SWS:NREP 1 BL:SWS:REP 1->317|HLDD_NITOC|0.0|100.0|317/317| GO:SWS:NREP 2 GO:SWS GO:0005975|"GO:carbohydrate metabolic process"|Carbohydrate metabolism| GO:SWS GO:0016853|"GO:isomerase activity"|Isomerase| BL:PDB:NREP 1 BL:PDB:REP 1->312|1eq2D|e-109|66.3|303/306| RP:PDB:NREP 1 RP:PDB:REP 2->316|1e7rA|4e-24|15.1|299/314| RP:PFM:NREP 1 RP:PFM:REP 2->239|PF01370|2e-12|36.0|214/232|Epimerase| HM:PFM:NREP 1 HM:PFM:REP 2->242|PF01370|1.2e-44|31.2|224/238|Epimerase| GO:PFM:NREP 3 GO:PFM GO:0003824|"GO:catalytic activity"|PF01370|IPR001509| GO:PFM GO:0044237|"GO:cellular metabolic process"|PF01370|IPR001509| GO:PFM GO:0050662|"GO:coenzyme binding"|PF01370|IPR001509| RP:SCP:NREP 1 RP:SCP:REP 2->311|1sb8A|5e-36|22.8|302/341|c.2.1.2| HM:SCP:REP 1->312|1eq2A_|9.7e-66|30.6|304/307|c.2.1.2|1/1|NAD(P)-binding Rossmann-fold domains| OP:NHOMO 858 OP:NHOMOORG 595 OP:PATTERN ------1---------21-1---12--1321122221212-2--11312112-12112111-112-1- 13-----1-------------------------------11----1---11-111--1--2---1-1--1------------112221--1--------2-11---21----------------111211211121-111-----13-2211211--------21-12222------11----111-1112-211111121111-1-3115222111112111-1-1111-222111-1111111111----12-1-11------2--11-32---1--121-111111------------------------1--111----21-412221-21-1-1----11-1----3--1---2-12222-1112-2-1211112-----1-22221121312111111111---22132112-21-222-1212314321------1211---1111111121111121------------------------------1----222122222222111122131111113221211111111-----112----21111111111111--1111111-1112313442311111-213-----3-3232112213322122222221111-11111-3-1---1--1-2-11----1112-11---2211------12211121112112121-1111121111111111111111112131111111111111111311111121-111111111111111-22222----2-11111111111111111111--1----1--1112-----121--1-1---------121111111111111----------------21112222--------1------------------1--------11222-2---1-2 ------1----1--1-----------1-----------------------------------------------1--------------------------------1----------------11--------------------------------------------4--1-2--1M212--3234-29-123221 -----------------------2------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 317 STR:RPRED 100.0 SQ:SECSTR cEEEETTTcHHHHHHHHHHTTcEEEEEEccccTTcTTEEEEcccTTTccTTcHHHHHHHHHHHHcccEEEEcccccccHHHHHHcHHHHHHHHHHHHHHHHHHHHHTTccEEEEEccGGGccTTGGGTTcccccGGGHHHHHHHHHHHHHHHHHHHHHccEEEEEEEcEEEcTTccccTTcccHHHHHHHHHHEHHHHHTccEEEEEcccccEEcEEEHHHHHHHHHHHHHccHHHHHHTccTTcccEEEcccccEEHHHHHHHHHcEEEEETTccccccccccccHHHHHTTcccccccHHHHHHHHHHHHHHTcH DISOP:02AL 316-318| PSIPRED cEEEEccccHHHHHHHHHHHHccccEEEEEEccccccHHHHcccccEEEEEccHHHHHHHHHHHHHcccccEEEEccccccccccccHHHHHHHHHHHHHHHHHHHHccccEEEEEcccEEcccccccccccccccccHHHHHHHHHHHHHHHHHHHccccEEEEEccccccccccccccHHHHHHHHHHHHccccccEEcccccccccccEEEccEEHHHHHHHHHHHHHccccccEEEccccccEEHHHHHHHHHHHHcccccEEEccccccccccccEEEccHHHHHHHccccccccHHHHHHHHHHHHHHccc //