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Nitrosococcus oceani ATCC 19707 (noce0)
Gene : ABA59072.1
DDBJ      :             Peptidase M48, Ste24p
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  419/915 : Eukaryota  89/199 : Viruses  0/175   --->[See Alignment]
a.118.8b.29.1
:484 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   39->265 3c37A PDBj 4e-26 34.5 %
:BLT:PDB   358->455 3fwvA PDBj 4e-05 24.5 %
:RPS:PDB   42->282 3c37B PDBj 6e-31 31.0 %
:RPS:PDB   260->446 2cfuA PDBj 1e-15 9.9 %
:RPS:SCOP  46->114 1avbA  b.29.1.1 * 2e-06 28.6 %
:RPS:SCOP  287->480 1w3bA  a.118.8.1 * 2e-13 18.9 %
:HMM:SCOP  266->466 2c2lA1 a.118.8.1 * 1.2e-14 26.0 %
:RPS:PFM   63->253 PF01435 * Peptidase_M48 4e-15 39.0 %
:HMM:PFM   44->253 PF01435 * Peptidase_M48 2.2e-40 28.1 203/225  
:HMM:PFM   347->375 PF07719 * TPR_2 0.00053 31.0 29/34  
:HMM:PFM   427->459 PF07719 * TPR_2 2.9e-05 27.3 33/34  
:HMM:PFM   454->482 PF05120 * GvpG 0.00051 20.7 29/80  
:BLT:SWISS 3->476 YFGC_SHIFL 4e-69 37.2 %
:TM
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID ABA59072.1 GT:GENE ABA59072.1 GT:PRODUCT Peptidase M48, Ste24p GT:DATABASE GIB00281CH01 GT:ORG noce0 GB:ACCESSION GIB00281CH01 GB:LOCATION 2974519..2975973 GB:FROM 2974519 GB:TO 2975973 GB:DIRECTION + GB:PRODUCT Peptidase M48, Ste24p GB:PROTEIN_ID ABA59072.1 GB:DB_XREF GI:76884391 InterPro:IPR001440 InterPro:IPR001915 LENGTH 484 SQ:AASEQ MEKLRVQLLSTVLWSVILLTVPILSADEIELPEIGDHSGVAISPEQERSIGQAFMRRLRNSVTIIEDPEITTYIQSLGFRLVANSDNPGQGFTFFVVQDPTINAFAAPGGYIGIHSGLVENSQTESELAAVLAHEIAHVTQRHLARAFEQRSRLSLPMTAALVAALILGIENPNAGLAGLAAVQAGAAQLQINFTRSNEKEADRVGMQTLVRSGFDPFAMPAFFERLQQASRYYGTRPPEFLSTHPVTTNRIADAMGRAQALSPQPVKEHLHFHLARAKLQVLSSDNYEQTVRQFSQALETGRYVNEAATRYGYALALVENGDPRKARQQILKLLEKNGDNRTYRLALARVEEAAGRFETAFEIYENAQKLYPDDYAVVVNYASALLQGHRPQTARDLLRRQVQLGTATGRLYHLLAQAEGDAGNRAESHRWLAEYYYYNGQPERAIKQLQLASKAANDNFYQRSKIEARLRQLQREVDAGENT GT:EXON 1|1-484:0| BL:SWS:NREP 1 BL:SWS:REP 3->476|YFGC_SHIFL|4e-69|37.2|471/487| TM:NTM 1 TM:REGION 7->29| SEG 175->191|aglaglaavqagaaqlq| BL:PDB:NREP 2 BL:PDB:REP 39->265|3c37A|4e-26|34.5|197/217| BL:PDB:REP 358->455|3fwvA|4e-05|24.5|98/128| RP:PDB:NREP 2 RP:PDB:REP 42->282|3c37B|6e-31|31.0|210/216| RP:PDB:REP 260->446|2cfuA|1e-15|9.9|182/627| RP:PFM:NREP 1 RP:PFM:REP 63->253|PF01435|4e-15|39.0|172/208|Peptidase_M48| HM:PFM:NREP 4 HM:PFM:REP 44->253|PF01435|2.2e-40|28.1|203/225|Peptidase_M48| HM:PFM:REP 347->375|PF07719|0.00053|31.0|29/34|TPR_2| HM:PFM:REP 427->459|PF07719|2.9e-05|27.3|33/34|TPR_2| HM:PFM:REP 454->482|PF05120|0.00051|20.7|29/80|GvpG| GO:PFM:NREP 3 GO:PFM GO:0004222|"GO:metalloendopeptidase activity"|PF01435|IPR001915| GO:PFM GO:0006508|"GO:proteolysis"|PF01435|IPR001915| GO:PFM GO:0016020|"GO:membrane"|PF01435|IPR001915| RP:SCP:NREP 2 RP:SCP:REP 46->114|1avbA|2e-06|28.6|63/226|b.29.1.1| RP:SCP:REP 287->480|1w3bA|2e-13|18.9|175/388|a.118.8.1| HM:SCP:REP 266->466|2c2lA1|1.2e-14|26.0|196/0|a.118.8.1|1/1|TPR-like| OP:NHOMO 727 OP:NHOMOORG 508 OP:PATTERN -------------------------------------------------------------------- -54--------------------------------------------------------------------------------1--11-----111---11111211111--------------1-----1---1-----------343233-1111------1-222212-------------------1--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------22--11311111--1111111222111111111111-11111111113-211111211222112111--------1-------------12-11-11111-----------------11111122112222212222111111222211111222223311122133112222122321413211---1-1-22223112132122121221223211121-22123-12-1111----------------2-----222221222222222222222222212233---3232------11111111111111111-1111111111111111111111111111111111111111111111111111-111111111111--12-----111123421---1-------11-122222222222233332212222212121---------22112222222222211111111111111--1-221111--------1--------------------------------------2- ----11------222-11-111111----11-1--------------1-------111111111--111-11-1111-11111111-1---111-1---11--1-1----2-------1--------1-331-2111---1--111-11-1--1-11-1----122-------1-111------1---1-1-112222- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 434 STR:RPRED 89.7 SQ:SECSTR #################################EEETTEEEccHHHHHHHHHHHHHHHHTTccccccHHHHHHHHHHHHHHHTTccccccccEEEEEccccccEEEETTTEEEEEHHHHHHcccHHHHHHHHHHHHHHHHTTHHHHHHHHHcHHHHHHHHHccHHHHHHHccccHHHHHHccccHHHHcTTccccHHHHHHHHHHHHHHHHHTTccTTHHHHHHHHHT#############TccccccHHHHHHHHHHHHTcccccccccHHHHHHHHHHHTccGGTccccHHHHHHHHHHHTTcHHHHHHHHHHHHHHHTTcHHHHHHHHHHHHHHcTTcHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHccccccccHHHHHHccHHHHHHHHHHHccHHHHTTccEEEEEEETTTTEEEEEEEETTEEEEEETcccTHHTTccEHHccHHHTTHHHHHHHTcccccccccc#### DISOP:02AL 1-7, 477-484| PSIPRED ccHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHcccHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHcccccccEEEEEEEcccccEEEccccEEEEEHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHcccccHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHccHHHHHHHHHHHHHHccccHHHHHHHHHHHHHcccHHHHHHHHHHHHHHccccHHHHHHHHHHHHHcccHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHcccccc //