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Nitrosococcus oceani ATCC 19707 (noce0)
Gene : ABA59117.1
DDBJ      :             Rare lipoprotein B
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  76/915 : Eukaryota  0/199 : Viruses  0/175   --->[See Alignment]
:161 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   11->152 2jxpA PDBj 8e-11 27.1 %
:RPS:PDB   7->153 3bf2A PDBj 2e-10 22.7 %
:RPS:PFM   10->153 PF04390 * RplB 5e-21 34.0 %
:HMM:PFM   10->154 PF04390 * RplB 1.4e-42 39.3 145/147  
:BLT:SWISS 2->150 LPTE_ERWCT 3e-10 24.5 %

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID ABA59117.1 GT:GENE ABA59117.1 GT:PRODUCT Rare lipoprotein B GT:DATABASE GIB00281CH01 GT:ORG noce0 GB:ACCESSION GIB00281CH01 GB:LOCATION complement(3018530..3019015) GB:FROM 3018530 GB:TO 3019015 GB:DIRECTION - GB:PRODUCT Rare lipoprotein B GB:PROTEIN_ID ABA59117.1 GB:DB_XREF GI:76884436 InterPro:IPR007485 LENGTH 161 SQ:AASEQ MLSLLFLVGCGFHLRGGSELSPLLNQTYLQGVAPYSQLGIGLKRRLEAHGITVTSVPEEATALLSITYNQLQRQVLSVESTGKVQEYALKYVLQFQVINSKGEVLLPSQRLELMRQYLFDQSSVISAGEQEKLLRETLQNDMVQQILWRLEALPPPHVDES GT:EXON 1|1-161:0| BL:SWS:NREP 1 BL:SWS:REP 2->150|LPTE_ERWCT|3e-10|24.5|147/184| BL:PDB:NREP 1 BL:PDB:REP 11->152|2jxpA|8e-11|27.1|140/155| RP:PDB:NREP 1 RP:PDB:REP 7->153|3bf2A|2e-10|22.7|119/122| RP:PFM:NREP 1 RP:PFM:REP 10->153|PF04390|5e-21|34.0|144/147|RplB| HM:PFM:NREP 1 HM:PFM:REP 10->154|PF04390|1.4e-42|39.3|145/147|RplB| GO:PFM:NREP 2 GO:PFM GO:0016044|"GO:cellular membrane organization"|PF04390|IPR007485| GO:PFM GO:0043165|"GO:Gram-negative-bacterium-type cell outer membrane assembly"|PF04390|IPR007485| OP:NHOMO 76 OP:NHOMOORG 76 OP:PATTERN -------------------------------------------------------------------- --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------111111----1-1111----11111--1-1111----1------111-11111111---------111111------------------------------------------------------------------1---------------------1---1--1--------------------------------------------------------------------------------------------------11111-1-----------------111111------11111----1-11-1-1------------------------111-1--1111111----------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 147 STR:RPRED 91.3 SQ:SECSTR ######ccccEEEEEccHHHHHHHHHHHHHTTcEEccHHHHHHHHHHHHccEEEcccTTccEEEEEEEEEEEEEEcccETccccccEEEEEEEEEEEEETTEEEEccccEEEEEEEEccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHTT######## DISOP:02AL 156-161| PSIPRED cHHHHHHHHcccccccccccccccEEEEEEEcccccHHHHHHHHHHHHcccEEEEccccccEEEEEEEccccEEEEEEEcccEEEEEEEEEEEEEEEEcccccEEcccEEEEEEEEEEccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccc //