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Nitrosococcus oceani ATCC 19707 (noce0)
Gene : ABA59165.1
DDBJ      :             hypothetical protein
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  19/915 : Eukaryota  26/199 : Viruses  0/175   --->[See Alignment]
d.269.1
:180 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   11->153 2pn7B PDBj 1e-12 32.6 %
:RPS:PDB   9->153 3cryB PDBj 3e-18 30.7 %
:RPS:SCOP  10->150 1vkbA  d.269.1.1 * 5e-13 18.0 %
:HMM:SCOP  8->141 1v30A_ d.269.1.1 * 1.5e-14 29.9 %
:RPS:PFM   12->112 PF06094 * AIG2 1e-06 35.4 %
:HMM:PFM   11->113 PF06094 * AIG2 6.8e-13 28.3 99/104  
:BLT:SWISS 11->153 GGCT_HUMAN 4e-12 32.6 %

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID ABA59165.1 GT:GENE ABA59165.1 GT:PRODUCT hypothetical protein GT:DATABASE GIB00281CH01 GT:ORG noce0 GB:ACCESSION GIB00281CH01 GB:LOCATION 3077139..3077681 GB:FROM 3077139 GB:TO 3077681 GB:DIRECTION + GB:PRODUCT hypothetical protein GB:PROTEIN_ID ABA59165.1 GB:DB_XREF GI:76884484 LENGTH 180 SQ:AASEQ MVEREKALLYYFAYGSNMAVERLRARVPSARRIVTARLMGYALRFHKKGMDGSGKCDVVSTGNPADCVHGIVFEIATAEKPALDRVEGPRYIQQNVQLALADGNWVDAFLYVVADKRRFTDAAMKPFCWYKYHVLYGARSNGLPGDYIARIEAELEQPDGDDQRRAHEMRIYAKGAACGP GT:EXON 1|1-180:0| BL:SWS:NREP 1 BL:SWS:REP 11->153|GGCT_HUMAN|4e-12|32.6|138/188| BL:PDB:NREP 1 BL:PDB:REP 11->153|2pn7B|1e-12|32.6|138/169| RP:PDB:NREP 1 RP:PDB:REP 9->153|3cryB|3e-18|30.7|140/169| RP:PFM:NREP 1 RP:PFM:REP 12->112|PF06094|1e-06|35.4|96/103|AIG2| HM:PFM:NREP 1 HM:PFM:REP 11->113|PF06094|6.8e-13|28.3|99/104|AIG2| RP:SCP:NREP 1 RP:SCP:REP 10->150|1vkbA|5e-13|18.0|133/147|d.269.1.1| HM:SCP:REP 8->141|1v30A_|1.5e-14|29.9|117/0|d.269.1.1|1/1|BtrG-like| OP:NHOMO 46 OP:NHOMOORG 45 OP:PATTERN -------------------------------------------------------------------- ----------------------------------------------------------------------------------------------------------------------------------------1--1------1-------1-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1---1-1-----1--------------------------------------------------------------------------------------------1--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1--1------------------11---1111--------------------------------------------------------------------------------------------------------1---------------------------1------------------------------------------------------------------------------------------------------------------- ---------------------------------------------------------1-----------------------------------------------------2--------1-111-11-111-1111-111-11--11-11--1---1----------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 157 STR:RPRED 87.2 SQ:SECSTR ########EEEEEccGGGcHHHHHHHcTTcEEEEEEEEEEEEEEEEEETTcccTTTccEEEEEEEEEEEEEEEEEEGGGHHHHHHHTTTTcEEEEEEEEETTccEEEEEEEEcccEEEEEEEEccccHHHHHHHHHHHHHTTccHHHHHHHHTcccccccccccH############### DISOP:02AL 1-5| PSIPRED ccccccccEEEEEEcccccHHHHHHHcccccEEEEEEEccEEEEEccccccccEEccEEEEcccccEEEEEEEEEcHHHHHHHHHHcccEEEEEEEEEEEccccEEEEEEEEEEcccccccccccccHHHHHHHHHHHHHHcccHHHHHHHHccccccccccccccccHHHHHHHccccc //