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Nitrosococcus oceani ATCC 19707 (noce0)
Gene : ABA59173.1
DDBJ      :             hypothetical protein
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  5/915 : Eukaryota  0/199 : Viruses  0/175   --->[See Alignment]
b.69.10b.69.2
:966 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   78->213 1l0qA PDBj 5e-07 32.6 %
:BLT:PDB   396->482 1l0qA PDBj 3e-05 33.3 %
:RPS:PDB   483->733 2c1uD PDBj 5e-04 12.8 %
:RPS:SCOP  45->214 1jmxB  b.69.2.2 * 2e-09 19.1 %
:RPS:SCOP  399->558 1jmxB  b.69.2.2 * 1e-06 11.5 %
:HMM:SCOP  34->476 1jofA_ b.69.10.1 * 3e-26 22.2 %
:RPS:PFM   44->217 PF10282 * Muc_lac_enz 6e-07 31.4 %
:RPS:PFM   399->472 PF10282 * Muc_lac_enz 7e-05 28.4 %
:HMM:PFM   35->210 PF10282 * Muc_lac_enz 8.2e-07 25.4 169/345  
:HMM:PFM   399->485 PF10282 * Muc_lac_enz 0.00023 21.2 85/345  
:HMM:PFM   590->647 PF09414 * RNA_ligase 0.00079 19.0 58/184  
:BLT:SWISS 29->72 6PGL_ERWCT 7e-04 38.6 %
:TM
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID ABA59173.1 GT:GENE ABA59173.1 GT:PRODUCT hypothetical protein GT:DATABASE GIB00281CH01 GT:ORG noce0 GB:ACCESSION GIB00281CH01 GB:LOCATION complement(3087121..3090021) GB:FROM 3087121 GB:TO 3090021 GB:DIRECTION - GB:PRODUCT hypothetical protein GB:PROTEIN_ID ABA59173.1 GB:DB_XREF GI:76884492 LENGTH 966 SQ:AASEQ MTIFFSRPKFFLWVMFGVMLVSMIAISPAQSEITVFESGQVRPLALSPDGRHLFAVNTPDNRLEIFRVRKRGLRHIDSIPVGLEPVAVAARSNREVWVVNHLSDSVSIVDVHRPRFRRVVRTLLVGDEPRDIVFAGPDRGRAFITTAHRGQNTGRDPQLTTPGVGRADVWVFDANQLGDSLEGEPLTVLTLFTDTPRALAATPDGALVYAAGFHTGNRTTTLNEFLVRQAIAPPDPRIYPGPLTNHEGILQPTVGLIVKYDGAHWVDELGQQWDDLVPFTLPDQDVFTIDAMANPPREVEGGAYSGVGTVIFNMIVNPVSGVVYVSNTEAQNQNRFEGAGIFSGGRTVRGHLHESHITVLGRKARVEPRHLNKHIDYSQCCAPIPNEENDTSIAFPQDMALTQDGSILYVTAFGTSEIAVYETSKLEDDTFIPDPANQIPVSGGGPSGIVLDEVRGRLYVLTRFDNSISIIDTANRSEVSHIAMYNPEPAHIVAGRRFLYDASFTSSHGDSACASCHVFGDFDGLAWDLGDPDDVETLNTGPFRVSEGVGFFLLRGRAENSHFRPMKGPMTTQSLRGLDNHGSMHWRGDRTGGNEAILGESAGPNAQPNGGSFDEDLAFRKFNVAFMSLNGRHDFIPEEEMQQFTDFVLEITYPPNPIRNLDNSLTEQQQAGQDFYFREQPSDTFLSCNGCHVLDPDGNREFVEVKKPGFFGTDGQFSFEGESQFFKIPHLRNLYQKVGMFGMAPPPPPSPPPFDPSQPAPLGSLIFAPLANNGSMGPQVRGFGFLHDGSTDTVFRFLSGAVFAAREPGTIPSLDPRTPPDMVPDPGNLGGLPLTPEGIAQRRELEAFLLAFDSNLAPIVGQQVTLTHSNGAEVGARIDLLIAQAEAKACDLVAKNRWGSFLYIGKGKFRGSYRWIPSVSDFLLRATAYLPYGELTYTCAPPGSGVRMGIDRDEDGLLDGHDRRVG GT:EXON 1|1-966:0| BL:SWS:NREP 1 BL:SWS:REP 29->72|6PGL_ERWCT|7e-04|38.6|44/100| TM:NTM 1 TM:REGION 9->29| SEG 744->761|apppppspppfdpsqpap| BL:PDB:NREP 2 BL:PDB:REP 78->213|1l0qA|5e-07|32.6|132/385| BL:PDB:REP 396->482|1l0qA|3e-05|33.3|78/385| RP:PDB:NREP 1 RP:PDB:REP 483->733|2c1uD|5e-04|12.8|218/322| RP:PFM:NREP 2 RP:PFM:REP 44->217|PF10282|6e-07|31.4|153/311|Muc_lac_enz| RP:PFM:REP 399->472|PF10282|7e-05|28.4|71/311|Muc_lac_enz| HM:PFM:NREP 3 HM:PFM:REP 35->210|PF10282|8.2e-07|25.4|169/345|Muc_lac_enz| HM:PFM:REP 399->485|PF10282|0.00023|21.2|85/345|Muc_lac_enz| HM:PFM:REP 590->647|PF09414|0.00079|19.0|58/184|RNA_ligase| RP:SCP:NREP 2 RP:SCP:REP 45->214|1jmxB|2e-09|19.1|157/339|b.69.2.2| RP:SCP:REP 399->558|1jmxB|1e-06|11.5|152/339|b.69.2.2| HM:SCP:REP 34->476|1jofA_|3e-26|22.2|261/0|b.69.10.1|1/1|3-carboxy-cis,cis-mucoante lactonizing enzyme| OP:NHOMO 9 OP:NHOMOORG 5 OP:PATTERN -------------------------------------------------------------------- --1--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------15-1------------------------------------------------------------1----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 428 STR:RPRED 44.3 SQ:SECSTR #############################################################################EEEccccEEEEEcTTccEEEEEEGGGTEEEEEET###TTTEEEEEEEccccEEEEE#EcTTccEEEEEETTTEEEEEETTTTEEEEccccEEEEETccEETTTEEEEEETTTTEEEEEEEEEEEcTTccEEEEEET######################################################################################################################################################################################EEEEEEcTTccEEEEEETTTTEEEEE#######ETTTTEEEEEEEc#cccEEEEEEcTTccEEEE#EETTTEEEEEETTTTEEEEEEccEEccHHHHHHHHHHHHcGGG#cTTccccHHHHcTTTTTccccccccccTTccccccccccTTGGG######ccccccEEEHHHHHTccccTTTTTcccHHHHHHHHHHTcHHHHHHHHHHcTTccccccHHHHHHHHHHHHTTccccccHHHH###############HHTTc####GGGccHHHHHHHHHHHHTT#######GGGTcccTTTccccEEEEEEccccccEEEEEcGGGcEEEEccccTT######################################################################################################################################################################################################################################### DISOP:02AL 600-612, 748-756, 961-966| PSIPRED cEEEEEcccEEEEEEEcccEEEEEEccccEEEEEEcccccEEEEEEEccccEEEEEEccccEEEEEEcccccEEEEEEEEcccccEEEEEEcccEEEEEEEcccEEEEEEccccccEEEEEEEEccccccEEEEEEccccEEEEEEcccccEEEEEEEcccccEEEEEEEEcccEEEEEEccccEEEEEEcccccEEEEEEEccccEEEEEEEccccEEEEEEEEEccEEEEccccccccccccccccEEEccEEEEEEccccEEEEEEccccccEEEEEEccccEEEEEccccccEEEEEEEEEccccEEEEEEEEccccEEEEEEcccccEEEEEEEEEEcccEEEccccccEEEEEcccccEEEcccccEEEEEcccEEEEcccccccEEcccccEEEcccccEEEEEEcccccEEEEEcccccccEEccccccEEEEEEcccccEEEcccccEEEEEEccccEEEEEEcccccEEEEEEEEccccccEEEccEEEccccccccccccccEEEEEEcccccEEccccccccccccccccEEEEcccEEEEEEEcccccccccccccccHHHHccccccccEEEEcccccccEEEEEccccccccccccccccccEEEEEEEEEEEEccccccccHHHHHHHcEEEEEEEccccHHHHHHHHHHHHHHcccccEEEEcccccEEEEcccEEEcccccEEEEEEEcccccccccEEEEccccEEEEccHHHHHHHHHcccccccccccccccccccccccccEEEEEEEcccccccccEEEEEEEEcccHHHHHHHHcccEEEEccccccccccccccccccccccccccccccHHHHHHHHHEEEEEEEEccccccccccEEEEEEcccccccEEEEEEEEEccccEEEEEEccccccEEEEEccEEcccEEEcccHHHHHHHHEEEcccccEEEEEccccccEEEEccccccccccccccccc //