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Nitrosococcus oceani ATCC 19707 (noce0)
Gene : ABA59206.1
DDBJ      :             Fibronectin, type III
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  4/915 : Eukaryota  0/199 : Viruses  0/175   --->[See Alignment]
b.1.2b.12.1
:490 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   80->161 1fnhA PDBj 1e-04 30.4 %
:RPS:PDB   77->168 2cuhA PDBj 3e-13 18.2 %
:RPS:PDB   177->263 3bndA PDBj 1e-04 17.2 %
:RPS:SCOP  77->168 1bp3B2  b.1.2.1 * 3e-14 15.2 %
:RPS:SCOP  173->282 1ca1A2  b.12.1.3 * 2e-06 23.4 %
:HMM:SCOP  77->168 1tdqA2 b.1.2.1 * 5.4e-17 34.8 %
:HMM:SCOP  170->294 1ca1A2 b.12.1.3 * 1.6e-08 28.4 %
:RPS:PFM   80->156 PF00041 * fn3 1e-06 39.2 %
:RPS:PFM   179->263 PF01477 * PLAT 1e-04 30.1 %
:HMM:PFM   79->160 PF00041 * fn3 6.6e-12 36.4 77/85  
:HMM:PFM   176->266 PF01477 * PLAT 1.5e-05 20.2 84/118  
:BLT:SWISS 76->160 TITIN_HUMAN 5e-06 37.8 %
:BLT:SWISS 190->264 LOX5_MESAU 3e-05 38.0 %
:TM

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID ABA59206.1 GT:GENE ABA59206.1 GT:PRODUCT Fibronectin, type III GT:DATABASE GIB00281CH01 GT:ORG noce0 GB:ACCESSION GIB00281CH01 GB:LOCATION 3128883..3130355 GB:FROM 3128883 GB:TO 3130355 GB:DIRECTION + GB:PRODUCT Fibronectin, type III GB:PROTEIN_ID ABA59206.1 GB:DB_XREF GI:76884525 InterPro:IPR003961 LENGTH 490 SQ:AASEQ MANTYLVERFCAVFAALIMVVFLTSTQAMAQSCENACGDQHHLCLDDCTAHSPHNICVPLCRADRARCLEDCNNPIPHAPENVTLVEREATSIELRWRDRADNEDGYQLLRRVGASGPWSIQASWGPWSGTTTYTDTGLLPDTLYCYRVRAFNRNGGNNPLSRCAFTKDGNGYAVWRAQIIFHTANVSNANTDDKVYVNLNGYANAVPRNNSTWLDYGRNDFERGTTYAYDLNLDYLGEIGDINQINISKTGDDGWCIQDFTLQVNGLDLFTQDFSNLSGGCLWLDSEGGHSRTHIVSHGALRAHPDWNSYNHTGAKLLLANNGIKNEEMVSRLEGMVGDDIHDNKLYWGHLHGPAVEVSYGCPAGAASCQTLHIDLDLAASAPGPNPEVDVDFDLTFSCDNRQLLITSSNVEIDADSNWFWEILSLGLINFIDNAVEERIEKGWKAITEVIEVGADCRISVDTEGNLLIEEGESFNRAKNLPKLDLKVR GT:EXON 1|1-490:0| BL:SWS:NREP 2 BL:SWS:REP 76->160|TITIN_HUMAN|5e-06|37.8|82/34350| BL:SWS:REP 190->264|LOX5_MESAU|3e-05|38.0|71/673| TM:NTM 1 TM:REGION 7->29| BL:PDB:NREP 1 BL:PDB:REP 80->161|1fnhA|1e-04|30.4|79/269| RP:PDB:NREP 2 RP:PDB:REP 77->168|2cuhA|3e-13|18.2|88/115| RP:PDB:REP 177->263|3bndA|1e-04|17.2|87/817| RP:PFM:NREP 2 RP:PFM:REP 80->156|PF00041|1e-06|39.2|74/85|fn3| RP:PFM:REP 179->263|PF01477|1e-04|30.1|83/115|PLAT| HM:PFM:NREP 2 HM:PFM:REP 79->160|PF00041|6.6e-12|36.4|77/85|fn3| HM:PFM:REP 176->266|PF01477|1.5e-05|20.2|84/118|PLAT| RP:SCP:NREP 2 RP:SCP:REP 77->168|1bp3B2|3e-14|15.2|92/104|b.1.2.1| RP:SCP:REP 173->282|1ca1A2|2e-06|23.4|107/121|b.12.1.3| HM:SCP:REP 77->168|1tdqA2|5.4e-17|34.8|92/0|b.1.2.1|1/1|Fibronectin type III| HM:SCP:REP 170->294|1ca1A2|1.6e-08|28.4|116/121|b.12.1.3|1/1|Lipase/lipooxygenase domain (PLAT/LH2 domain)| OP:NHOMO 4 OP:NHOMOORG 4 OP:PATTERN -------------------------------------------------------------------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1---------1--------------------------------------------------------------1----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 262 STR:RPRED 53.5 SQ:SECSTR ##EEEEEEEEccccccEEEEEEEcTTccccEEccEEEEETTcccEEEEEEEEcccccccccccccccccccHHHEcccccEEEEccccccccEEEEEEcccccccEEEEEEEccccccEEEEEEEEEcTTccEEEEcccccccEEEEEEEEEETTEEcccEEEEEEcccccTTEEEcccccccccccccccEEccccTTccTcEEEEEcTTccEEEHHHHcTTcEEEEEEEEEEcccGGGccEEEEEEEEcccccEEEEEEEEE################################################################################################################################################################################################################################## DISOP:02AL 1-3| PSIPRED ccccEEHHHHHHHHHHHEEEEEEEEcHHEEEEccccccccccEEEEcccccccccccEEEEEccccEEEEcccccccccccccEEEEEcccEEEEEEEcccccccEEEEEEEEcccccEEEEEEccccccccEEEEcccccccEEEEEEEEEEccccccccccEEEEEEccccccccccccccEEEEEEcccccEEEEEEEEEEEEcccccEEEEEcccccccccEEEEEEEEEEcccccccccEEEEEEEccccEEEEEEEEEEcccEEEccccccccEEEEEEcccccccEEEEEEccccccccccccccccccEEEEccccccHHHHHHHHHHEEccccccccEEEEEEcccEEEEEcccccccccEEEEEEEEEEEEccccccccEEEEEEEEEEccccEEEEEEccEEEEccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccEEEEcccccEEEEcccccHHHcccccEEEEEc //