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Nitrosococcus oceani ATCC 19707 (noce0)
Gene : ABA59215.1
DDBJ      :             Transposase
Swiss-Prot:             

Homologs  Archaea  23/68 : Bacteria  204/915 : Eukaryota  0/199 : Viruses  0/175   --->[See Alignment]
g.72.1
:392 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:RPS:PDB   102->205 3ee7B PDBj 1e-13 8.8 %
:RPS:SCOP  307->359 1wj0A  g.72.1.1 * 4e-14 15.1 %
:RPS:PFM   11->49 PF12323 * HTH_14 1e-04 43.6 %
:RPS:PFM   79->288 PF01385 * Transposase_2 9e-28 34.3 %
:RPS:PFM   301->368 PF07282 * Transposase_35 2e-14 50.7 %
:HMM:PFM   76->285 PF01385 * Transposase_2 1.3e-40 26.0 204/227  
:HMM:PFM   300->368 PF07282 * Transposase_35 2.3e-25 43.3 67/69  
:HMM:PFM   10->50 PF12323 * HTH_14 1.7e-15 41.5 41/46  
:BLT:SWISS 9->360 YSNA_STRPR 8e-50 33.3 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID ABA59215.1 GT:GENE ABA59215.1 GT:PRODUCT Transposase GT:DATABASE GIB00281CH01 GT:ORG noce0 GB:ACCESSION GIB00281CH01 GB:LOCATION complement(3140259..3141437) GB:FROM 3140259 GB:TO 3141437 GB:DIRECTION - GB:PRODUCT Transposase GB:PROTEIN_ID ABA59215.1 GB:DB_XREF GI:76884534 InterPro:IPR001959 InterPro:IPR010095 LENGTH 392 SQ:AASEQ MTEHDSTTVQRSYTFRFYPTSVQRQQLAMEFGHARWVWNTCLTWRGRQYRVHDKRVTGVDFSRQLTFLKGLGPYAWLKEASATCLIQKLRDQDTAFRHFFAGRAKYPRFKKRTHTQSIRYQLDQRQVAGMYRAGEFLKLPKLGALKLKWSRKPQGIPKMVTVTQDCVGRYCVSFMCEETLQPLPRKPNGIGVDLGVCDVVVTSEGWKSGNPRHLRTHTRQLRKTQRRLSRKRKSSVRWHRQRIRVAKAHARVSNTRQDWLHKLTTALIRQAGFIAMETLNVRGMMANRRLSRALGDVGMHELKRQLAYKAQWYGRAFRQVDRWAPTSKACSECAAVQETMPLNIREWTCPDCKSVHDRDINAARNILRLATVGRTGSDARGGVHKPEVAYGC GT:EXON 1|1-392:0| BL:SWS:NREP 1 BL:SWS:REP 9->360|YSNA_STRPR|8e-50|33.3|348/402| SEG 137->148|lklpklgalklk| SEG 212->235|rhlrthtrqlrktqrrlsrkrkss| RP:PDB:NREP 1 RP:PDB:REP 102->205|3ee7B|1e-13|8.8|102/115| RP:PFM:NREP 3 RP:PFM:REP 11->49|PF12323|1e-04|43.6|39/46|HTH_14| RP:PFM:REP 79->288|PF01385|9e-28|34.3|204/207|Transposase_2| RP:PFM:REP 301->368|PF07282|2e-14|50.7|67/70|Transposase_35| HM:PFM:NREP 3 HM:PFM:REP 76->285|PF01385|1.3e-40|26.0|204/227|Transposase_2| HM:PFM:REP 300->368|PF07282|2.3e-25|43.3|67/69|Transposase_35| HM:PFM:REP 10->50|PF12323|1.7e-15|41.5|41/46|HTH_14| RP:SCP:NREP 1 RP:SCP:REP 307->359|1wj0A|4e-14|15.1|53/58|g.72.1.1| OP:NHOMO 974 OP:NHOMOORG 227 OP:PATTERN ------1-7114--C--1------2--1323B-1---2----------115F3-----1---11---- ----1------------44-41----44444-----2-76-16J------------------1---B2113----51----------1--------------------2---------------------------C-12----4-11P4KH*CA11------21X19K25-------------28-----1A-33333-5C35431351-----23451-1-D3------4----------------1-----6-2--19-H2--5511-2---------------------------------------------------33---------2-4--922-53L34--4--11211A----2-----1--6-------------------------------------------2--------------------------------111111112-----------------------------------------------B88-3B-------1-------1----1------------A1----------------------2-------------------------------------------3-2-5-----------2-----2----31--------3------------2H-------------3--12221-1-32-22132113132-3111111-------D---1---1---1111121111223------------------------------1-------------64---------1J5----------------------------------------------------1-32----------2--5--1-------------------------------54-211-1E-- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 102 STR:RPRED 26.0 SQ:SECSTR #####################################################################################################ccEEEEEEEEcc##TTTcccEEEEEEEEccccccEEEEEEEccccccEEEEcTTcccEEEEEccccEEEEEccTTccEEEEEEEcTTccHHHHHHHHHHHHccc########################################################################################################################################################################################### DISOP:02AL 1-4, 229-237, 375-385, 387-392| PSIPRED cccccccEEEEEEEEEEcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHcccccHHHHHcccHHHHHHHHHHHHHHHHHHccccccccccccccccEEEEEEccEEEEEEEEcccEEEEEcccEEEEEEEEccccEEEEEEEEEEcccEEEEEEEEEcccccccccccEEEEEEcccEEEEEcccEEEccccHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccEEEEEEccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccEEEEEcccccccccccccccccccccccccEEEEccccEEEccHHHHHHHHHHHHcccccccccccccccccccccc //