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Nitrosococcus oceani ATCC 19707 (noce0)
Gene : ABA59218.1
DDBJ      :             ABC transporter, inner membrane subunit
Swiss-Prot:             

Homologs  Archaea  54/68 : Bacteria  764/915 : Eukaryota  6/199 : Viruses  0/175   --->[See Alignment]
f.58.1
:458 amino acids
:PSIPRED
:DISOPRED
:RPS:SCOP  317->400 3dhwA1  f.58.1.1 * 8e-08 16.9 %
:HMM:PFM   139->456 PF00528 * BPD_transp_1 7.6e-27 34.1 182/185  
:BLT:SWISS 1->196,318->457 APPB_BACSU 2e-29 44.3 %
:TM
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID ABA59218.1 GT:GENE ABA59218.1 GT:PRODUCT ABC transporter, inner membrane subunit GT:DATABASE GIB00281CH01 GT:ORG noce0 GB:ACCESSION GIB00281CH01 GB:LOCATION 3145055..3146431 GB:FROM 3145055 GB:TO 3146431 GB:DIRECTION + GB:PRODUCT ABC transporter, inner membrane subunit GB:PROTEIN_ID ABA59218.1 GB:DB_XREF GI:76884537 InterPro:IPR000515 LENGTH 458 SQ:AASEQ MSTYVIRRLLLMIPTLLGITLVVFAVMAASPGGISAQSLIEGQNLEPQAKKALEDYYNQLYGLDSPPAIQYLRWLNNASPAGFTFDEENHISGFSLWKGSDLGTSFRYGRPVLELIEERVPITLLLNILSLPFIYTLAIAVGVRAATERGKVFDVGSSALLLGLWSVPVMLTGVLLIGFFASNQYWHWFPTAGLNTREALDMPFLPHWGSLGEAALLLVAGVAGAGAGVGLAKAPRLLRVGLLAGLGMGLGFWMGAGLPHPHLGMSLSLGVLLALIIGGLGYTDYAGLRLGLLGLLGAGLGLTVAAQGGDGEFVRGFLLDRLWHLVLPVLCLTYSGFAFLSKLTRTAVLENLMADYARTARAKGLAENTVLWKHVFRNSLLPLITVSATLLPGLLAGSVIVESIFSIEGMGKLAVEAVQTRDRELVLSITLISGLLTLAGYLIADLCYAIADPRVSYD GT:EXON 1|1-458:0| BL:SWS:NREP 1 BL:SWS:REP 1->196,318->457|APPB_BACSU|2e-29|44.3|308/316| TM:NTM 10 TM:REGION 12->33| TM:REGION 123->145| TM:REGION 157->179| TM:REGION 209->231| TM:REGION 236->257| TM:REGION 263->284| TM:REGION 287->309| TM:REGION 322->344| TM:REGION 375->397| TM:REGION 426->448| SEG 209->232|gslgeaalllvagvagagagvgla| SEG 236->258|rllrvgllaglgmglgfwmgagl| SEG 263->281|lgmslslgvllaliigglg| SEG 286->309|aglrlgllgllgaglgltvaaqgg| SEG 425->438|lvlsitlisglltl| HM:PFM:NREP 1 HM:PFM:REP 139->456|PF00528|7.6e-27|34.1|182/185|BPD_transp_1| RP:SCP:NREP 1 RP:SCP:REP 317->400|3dhwA1|8e-08|16.9|83/203|f.58.1.1| OP:NHOMO 3298 OP:NHOMOORG 824 OP:PATTERN 44213-3233333312341211113336434212---1-----113-42-DA5-54432132314-1- -113C442333-3122222-2211292222224333164915-75A9516647A732311552395767942222522322-411111--------2--------11--122222222222222211111111121465952216A32213332211---1--322153211-1-11--1-11A5433981323666664564546445966653655314C521222222D6133433444433344322122222342-12111--33111112234333322211112211111112222222222222221111211111B26244434541422222111153133A-111BA631-282-3462134311----1121132FFM115844B19AAA9AA8AAJ-44C43A3DQN1-fPPUIJCURLNNJ4-115BBB6BB5BD--------21112218-------------------------------11--CEBCC66777644555559955552566D64A7113342353353C5BN241132242-------111221346132352233331111111211-----2111111------121222212213-12114321211-1131111111211111121111--13321------76JA2977777777776-7777777767777676775999A82255555555555555555776666674-444444434444---111111111111747333-1222212412222222121234333233558264442ABA1----1---245555555556588----------------12111111111111116-1111-1-1122111222-22112---337548E868212 -----------------------------------------------------------------------------------------------------------------1--------------------------------------------2----2---------1-----------1--1---------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- DISOP:02AL 42-53| PSIPRED cHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHccccccccHHHHHHHHHHHcccccHHHHHHHHHHHHHHccccccccccccccccccccccccccEEcccHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccc //