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Nitrosococcus oceani ATCC 19707 (noce0)
Gene : ABA59219.1
DDBJ      :             ABC transporter, inner membrane subunit
Swiss-Prot:             

Homologs  Archaea  56/68 : Bacteria  737/915 : Eukaryota  6/199 : Viruses  0/175   --->[See Alignment]
f.58.1
:378 amino acids
:PSIPRED
:DISOPRED
:RPS:SCOP  157->371 2r6gG1  f.58.1.1 * 5e-14 9.9 %
:HMM:PFM   194->375 PF00528 * BPD_transp_1 1.2e-27 27.5 171/185  
:BLT:SWISS 126->373 APPC_BACSU 5e-36 35.7 %
:TM
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID ABA59219.1 GT:GENE ABA59219.1 GT:PRODUCT ABC transporter, inner membrane subunit GT:DATABASE GIB00281CH01 GT:ORG noce0 GB:ACCESSION GIB00281CH01 GB:LOCATION 3146486..3147622 GB:FROM 3146486 GB:TO 3147622 GB:DIRECTION + GB:PRODUCT ABC transporter, inner membrane subunit GB:PROTEIN_ID ABA59219.1 GB:DB_XREF GI:76884538 InterPro:IPR000515 LENGTH 378 SQ:AASEQ MAQVTRQVLTQWGARLGLAWIGLLGILAVFAPFLASSHPLLLSQDGQMDSPLLRYLSPADVTLLALFFTALILALARASFRAWLGGVGSMLILAGVLSTALVQPPALAIYEQYRQQEAAGDYDWVLYAPIPYSPKDYQRDRGETGLQPPLASPQANHWFGTGENGADVLARMIHASRIALGIGFVATSIALLLGILIGGLMGYLSGVVDIIGMRLVEIFEAVPTLFLLLTFVAFFERSLYLLMVIIGLTSWSGYARYVRAEFLRLRQQDFVQAALACGLPLRSILFRHMLPNGIGPILVAASFGVASAILAEAVLSFLGLGLVDDPSWGQMLNQAVKSSTFNWWMAAFPGGAIFFTVFAYNLIGEALRDAIDPYLKKS GT:EXON 1|1-378:0| BL:SWS:NREP 1 BL:SWS:REP 126->373|APPC_BACSU|5e-36|35.7|241/303| TM:NTM 7 TM:REGION 20->42| TM:REGION 57->79| TM:REGION 87->109| TM:REGION 180->202| TM:REGION 225->247| TM:REGION 297->319| TM:REGION 347->369| SEG 12->28|wgarlglawigllgila| SEG 62->76|tllalfftalilala| SEG 189->206|ialllgiligglmgylsg| SEG 221->235|avptlfllltfvaff| HM:PFM:NREP 1 HM:PFM:REP 194->375|PF00528|1.2e-27|27.5|171/185|BPD_transp_1| RP:SCP:NREP 1 RP:SCP:REP 157->371|2r6gG1|5e-14|9.9|213/284|f.58.1.1| OP:NHOMO 3198 OP:NHOMOORG 799 OP:PATTERN 4441313233333343223331113334424212---1-----113-52-DA5-54432121213-11 1114B443344-4123322-22112A2222224333266819266C7435526A632411552365577833111733323-311211--------2--------11--122222222222222211111122121355852216924313331322------432153211-1-111-1--1A5433561423666664564546445A76663655324C521222222E6155555555555555333121112331--1111--3311111122433333331111221111111222222222222223--221---11C262444345414222221111531339-111BA631-282-2251153311----1121132HHN--5753A1AAAAA997AAK-44B4393DNM1-hOOVGGBTPJMMJ4-115AB95995CC1111111111122119----------------------------------1CFCAC57777544444558855552566C74A7113342343343C5CO241132242-------111211346122352233331111111111----14111-11-11-1--12212221112-1211553121111-41----1------1----11--13211------76IB3856666666666-6666666666666666666ABAB92234444444444434344866556463-333333332333---11-1-1111111747222-12222214122222221112342332335572644429A91----1---245545555556577--1-------------11111111111111116-1112------1-1-------------436659D988212 --------------------------------------------------------------------------------------------------------------------------------------------------------------1----2------1--1---1-------1------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- DISOP:02AL 1-4, 377-378| PSIPRED ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccEEEEEcccccccEEEEccccccccccccccHHHHHHHHHHHHHcccccccccccccHHHHHHccccccHHHHHHHHHHHHccccEEEEcccccccccccccHHHcccHHHccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccc //