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Nitrosococcus oceani ATCC 19707 (noce0)
Gene : ABA59223.1
DDBJ      :             NAD-dependent epimerase/dehydratase
Swiss-Prot:             

Homologs  Archaea  7/68 : Bacteria  229/915 : Eukaryota  14/199 : Viruses  0/175   --->[See Alignment]
c.2.1
:292 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   12->236 3gpiA PDBj 9e-21 32.9 %
:RPS:PDB   14->288 1e7rA PDBj 3e-14 11.4 %
:RPS:SCOP  8->288 1kbzA  c.2.1.2 * 2e-23 15.6 %
:HMM:SCOP  8->288 1g1aA_ c.2.1.2 * 8.3e-42 30.9 %
:RPS:PFM   85->210 PF01370 * Epimerase 8e-13 35.7 %
:RPS:PFM   201->281 PF11073 * NSs 5e-04 36.0 %
:HMM:PFM   16->212 PF01370 * Epimerase 1.2e-13 26.9 197/238  
:HMM:PFM   186->241 PF01073 * 3Beta_HSD 8.2e-05 30.4 56/280  
:BLT:SWISS 88->212 TGDS_HUMAN 3e-07 26.4 %
:BLT:SWISS 189->250 YCL2_ECO11 8e-04 37.7 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID ABA59223.1 GT:GENE ABA59223.1 GT:PRODUCT NAD-dependent epimerase/dehydratase GT:DATABASE GIB00281CH01 GT:ORG noce0 GB:ACCESSION GIB00281CH01 GB:LOCATION 3152595..3153473 GB:FROM 3152595 GB:TO 3153473 GB:DIRECTION + GB:PRODUCT NAD-dependent epimerase/dehydratase GB:PROTEIN_ID ABA59223.1 GB:DB_XREF GI:76884542 InterPro:IPR001509 InterPro:IPR002225 LENGTH 292 SQ:AASEQ MVSTPSRMPAFIVGFGDIGQRVAALWQRDGSEVTALIRTPRDTAGCCAIPGDLDQPETLHDMPQKPALLFHFAPPAPSGASDARTGHLLKVLEKAPPQRIVYISTSGVYGDCGGAWVDESRPVHPGNDRSRRRVDAEQQLRLFARRYALPLIILRVPGIYGSGRLPLERLRRGNPVVCPDQAPWSNRIHADDLATIAVRAGQSSIPAGIYNVSDDEPTSMTDYLYRLADAAGLPRPPCVSLAEARRNFSPKLLEYLNESRRLNNQKMKTVLGVKLRYPTLETGLPAALGISK GT:EXON 1|1-292:0| BL:SWS:NREP 2 BL:SWS:REP 88->212|TGDS_HUMAN|3e-07|26.4|125/350| BL:SWS:REP 189->250|YCL2_ECO11|8e-04|37.7|53/100| SEG 66->77|pallfhfappap| BL:PDB:NREP 1 BL:PDB:REP 12->236|3gpiA|9e-21|32.9|216/273| RP:PDB:NREP 1 RP:PDB:REP 14->288|1e7rA|3e-14|11.4|272/314| RP:PFM:NREP 2 RP:PFM:REP 85->210|PF01370|8e-13|35.7|126/232|Epimerase| RP:PFM:REP 201->281|PF11073|5e-04|36.0|75/237|NSs| HM:PFM:NREP 2 HM:PFM:REP 16->212|PF01370|1.2e-13|26.9|197/238|Epimerase| HM:PFM:REP 186->241|PF01073|8.2e-05|30.4|56/280|3Beta_HSD| GO:PFM:NREP 3 GO:PFM GO:0003824|"GO:catalytic activity"|PF01370|IPR001509| GO:PFM GO:0044237|"GO:cellular metabolic process"|PF01370|IPR001509| GO:PFM GO:0050662|"GO:coenzyme binding"|PF01370|IPR001509| RP:SCP:NREP 1 RP:SCP:REP 8->288|1kbzA|2e-23|15.6|275/298|c.2.1.2| HM:SCP:REP 8->288|1g1aA_|8.3e-42|30.9|278/0|c.2.1.2|1/1|NAD(P)-binding Rossmann-fold domains| OP:NHOMO 261 OP:NHOMOORG 250 OP:PATTERN -------------------------1111111------------------------------------ ----------------------------------------------------111--------------------------------------------------1------------------------------111-------1-11-----111311131-1-111-111111111111------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------11111-----11111---1----11111111111-1111111111111111111111111111-1111111111--------1---111111-11111-----------------111111111--111111111211111221111111111111111111111111111111111111111-------111111---------------1111211-111111----------------------------------11-1-------------------------1111--------------------------------------------------------------------------------------------------11111--11----------------------1111111-111-1111111111------------------------11--------------------------------------------------------------------1-- -------------------------------------------------------------------------------------------------------------------------------------------------------------------1---------1--1-1---11-1--1-111-212-- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 283 STR:RPRED 96.9 SQ:SECSTR #####ccEEEEEETTcHHHHHHHHHHTTcTTEEEEcccTTTccTTcHHHHHHHHHHHcccEEEEcccccccHHHHHHcHHHHHHHHHHHHHHHHTTccEEEEEccGGGccTTcccccccccccGGGHHHHHHHHHHHHHHHHHHHHHccEEEEEEEcEEEcTTccccTHHTccEEEEEcccccEEcEEEHHHHHHHHHHHHHccHHHHHHTccTTcccEEEcccccEEHHHHHHHHHHHHTcccEEEEETGTccccccccccccHHHHHHTTcccccccHHHHHHHHH#### DISOP:02AL 1-5| PSIPRED ccccccccEEEEEcccHHHHHHHHHHHHcccEEEEEEcccccccccEEEEEccccHHHHHHHHccccEEEEccccccccccHHHHHHHHHHHHHccccEEEEEEccEEEccccccccccccccccccHHHHHHHHHHHHHHHHHHHccccEEEEcccEEcccccHHHHHHHccccEEEcccccEEEEEEHHHHHHHHHHHHHccccccEEEEcccccccHHHHHHHHHHHHcccccccccHHHHHccccHHHHHHccccccccHHHHHHHcccccccccHHHHHHHHHHHcc //