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Nitrosococcus oceani ATCC 19707 (noce0)
Gene : ABA59232.1
DDBJ      :             Protein of unknown function DUF140
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  560/915 : Eukaryota  18/199 : Viruses  0/175   --->[See Alignment]
:260 amino acids
:PSIPRED
:DISOPRED
:RPS:PFM   42->256 PF02405 * DUF140 2e-40 48.6 %
:HMM:PFM   43->256 PF02405 * DUF140 3.6e-78 47.9 213/215  
:BLT:SWISS 1->258 YRBE_SHIFL 1e-82 59.7 %
:TM
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID ABA59232.1 GT:GENE ABA59232.1 GT:PRODUCT Protein of unknown function DUF140 GT:DATABASE GIB00281CH01 GT:ORG noce0 GB:ACCESSION GIB00281CH01 GB:LOCATION complement(3160122..3160904) GB:FROM 3160122 GB:TO 3160904 GB:DIRECTION - GB:PRODUCT Protein of unknown function DUF140 GB:PROTEIN_ID ABA59232.1 GB:DB_XREF GI:76884551 InterPro:IPR003453 LENGTH 260 SQ:AASEQ MIEALLRLGRWGLGTFERLGRGHLFLGQLLLSIATLLLRFPLLITQVYSVGVLTLPIIVVSGAFVGMVLGLQGYNTLVDFGAEESLGVIVSLSLVRELGPVVSALLFAGRAGSALTAEIGLMKATEQLSGMEMMAVDPVRRIAAPRFFAGCFSMPLLAAIFSAVGVLGGYFVGVGLLGVDEGAFWSQMQASTDWKEDVLNGVIKSIVFGIVVTWIAVFEGYDAVPTSDGVGRATTRTVVHSAFAVLALDFVLTALMFGAE GT:EXON 1|1-260:0| BL:SWS:NREP 1 BL:SWS:REP 1->258|YRBE_SHIFL|1e-82|59.7|258/260| TM:NTM 6 TM:REGION 18->40| TM:REGION 50->72| TM:REGION 91->113| TM:REGION 152->174| TM:REGION 199->221| TM:REGION 238->260| SEG 164->179|vgvlggyfvgvgllgv| RP:PFM:NREP 1 RP:PFM:REP 42->256|PF02405|2e-40|48.6|214/215|DUF140| HM:PFM:NREP 1 HM:PFM:REP 43->256|PF02405|3.6e-78|47.9|213/215|DUF140| OP:NHOMO 923 OP:NHOMOORG 578 OP:PATTERN -------------------------------------------------------------------- 111-----------59833-38--7733333498A87649----------------------2-122122-------------22111111--11-1--11111122222-------111----111111111131----------1122112111111111122111121111111111111-------1--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------2313221-----112222-22222211111111111-111111111121111111111111-22212122222111--------2111222311-1-111111111111111111111111-112122222122222222222222322222222222222222221222222222222221212111111122323252221123133222113133352212124434111-1111111111-1-111121112211212-111121111123111111111111--11222------11111111111111111-1111111111111111111121111111111111111111111111111111-211111111111--1-1111122222-1111111111111111111111111---2-2222222222222211122222222211111111111212122222222222222---1221111----------------------------------------------121 -------------------------------------------------------------------------------------------------------------------------------------------------------------------2-----------11117111111122-31--1---- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- DISOP:02AL 260-261| PSIPRED cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccc //