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Nitrosococcus oceani ATCC 19707 (noce0)
Gene : ABA59285.1
DDBJ      :             Conserved hypothetical protein 730
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  317/915 : Eukaryota  14/199 : Viruses  0/175   --->[See Alignment]
c.129.1
:271 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   128->250 1wekB PDBj 4e-23 44.2 %
:RPS:PDB   88->255 2a33B PDBj 1e-19 25.2 %
:RPS:SCOP  16->255 1wekA  c.129.1.1 * 1e-34 40.3 %
:HMM:SCOP  12->257 1wekA_ c.129.1.1 * 5.2e-50 40.1 %
:RPS:PFM   124->251 PF03641 * Lysine_decarbox 2e-17 46.3 %
:HMM:PFM   124->252 PF03641 * Lysine_decarbox 4.2e-30 35.7 126/133  
:HMM:PFM   64->129 PF02502 * LacAB_rpiB 0.00015 25.9 58/140  
:BLT:SWISS 88->212 Y4923_PSEAE 5e-08 41.2 %
:BLT:SWISS 184->250 Y5195_ARATH 5e-04 29.9 %
:TM
:COIL
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID ABA59285.1 GT:GENE ABA59285.1 GT:PRODUCT Conserved hypothetical protein 730 GT:DATABASE GIB00281CH01 GT:ORG noce0 GB:ACCESSION GIB00281CH01 GB:LOCATION 3215161..3215976 GB:FROM 3215161 GB:TO 3215976 GB:DIRECTION + GB:PRODUCT Conserved hypothetical protein 730 GB:PROTEIN_ID ABA59285.1 GB:DB_XREF GI:76884604 InterPro:IPR005269 LENGTH 271 SQ:AASEQ MPPKRRPLPESYRNEEFLSSREARSLRILSEYLEPQRRFARYKVDDTVVFMGSARTLPQAQAEQALKEAKESTGDISKAERQLEMSKYYEAARELARRLTEWSKALSDEERRFVVCTGGGPGIMEAANRGASEAKGMNIGLTISIPIEEFDNSYITRELSFHFHYFFMRKFWFAYLAKAIIVFPGGFGTLDELFELLTLMQTGKIRKHLPIILFGKAYWNEVINFDALVRYSNIDPQDLDLLYQTDSVDEAYAFLIDHLTRYAIEERGAIL GT:EXON 1|1-271:0| BL:SWS:NREP 2 BL:SWS:REP 88->212|Y4923_PSEAE|5e-08|41.2|114/195| BL:SWS:REP 184->250|Y5195_ARATH|5e-04|29.9|67/216| COIL:NAA 30 COIL:NSEG 1 COIL:REGION 59->88| TM:NTM 1 TM:REGION 171->193| SEG 59->71|qaqaeqalkeake| BL:PDB:NREP 1 BL:PDB:REP 128->250|1wekB|4e-23|44.2|120/206| RP:PDB:NREP 1 RP:PDB:REP 88->255|2a33B|1e-19|25.2|147/170| RP:PFM:NREP 1 RP:PFM:REP 124->251|PF03641|2e-17|46.3|121/131|Lysine_decarbox| HM:PFM:NREP 2 HM:PFM:REP 124->252|PF03641|4.2e-30|35.7|126/133|Lysine_decarbox| HM:PFM:REP 64->129|PF02502|0.00015|25.9|58/140|LacAB_rpiB| RP:SCP:NREP 1 RP:SCP:REP 16->255|1wekA|1e-34|40.3|201/208|c.129.1.1| HM:SCP:REP 12->257|1wekA_|5.2e-50|40.1|207/0|c.129.1.1|1/1|MoCo carrier protein-like| OP:NHOMO 368 OP:NHOMOORG 331 OP:PATTERN -------------------------------------------------------------------- 121111111111111---------------------11111111-1111---111111--111-1111111-111111----111111-----------111111111-1-------1-1----22212131111211111-----131111111111-1--11-1111111--111--11-1--111--1--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------111111111111----2--1-----11111111111---------11--111111111111--11-1111111111-------------11-------------------------------11111111112112111212222122222-212111121111111112111111---1111111111111121221-111111111-1111111111121--1---11-1111111111---------1111111-------1--------------------1----2111------------------------------------------------------------------------------------------------------------------------------------------1111111111111111111111-------------------------------1111--------------------------------------------------1-1 1-------311---1---------------------------------------------------------------------------------------------3-------------------------------------------------1----1---------1------1---1--12-1-------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 183 STR:RPRED 67.5 SQ:SECSTR ###########################################################################EEEEccccccHHHHHHHHHHHHHHHHHHHHHHHTTTTcEEEEcccccHHHHHHHHHHHTTccEEEEEEccccccEHHHHHHHHHHHEEEEccHHHHHHHHTccEEEEccccHHHHHHHHHHHHHHHTTccccEcEEEEcGGGTTHHHHHHHHHHHTTcccHHHHTTEEEEccHHHHHHHHcTT############# DISOP:02AL 1-6, 8-11| PSIPRED cccccccHHHHHccHHHHccccHHHHHHHHHHHHHHHHHHHcccccEEEEEccccccccccHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHcccccccccccEEEEEcccHHHHHHHHHHHHHcccEEEEEccccccccccccccccccEEEcccHHHHHHHHHHHccEEEEEcccccHHHHHHHHHHHHHHccccccEEEEEEcHHHHHHHHHHHHHHHcccccHHHcccEEEEccHHHHHHHHHHHHHHHccccccccc //