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Nitrosococcus oceani ATCC 19707 (noce0)
Gene : ABA59317.1
DDBJ      :             Cation efflux protein
Swiss-Prot:             

Homologs  Archaea  45/68 : Bacteria  682/915 : Eukaryota  26/199 : Viruses  0/175   --->[See Alignment]
d.58.20f.59.1
:317 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   47->307 2qfiA PDBj 3e-64 47.3 %
:RPS:PDB   227->312 3byrA PDBj 5e-16 36.0 %
:RPS:SCOP  25->229 2qfiA2  f.59.1.1 * 5e-36 44.6 %
:RPS:SCOP  219->312 1dq8A1  d.58.20.1 * 5e-18 17.0 %
:RPS:PFM   47->288 PF01545 * Cation_efflux 1e-26 35.5 %
:HMM:PFM   35->311 PF01545 * Cation_efflux 4.8e-63 30.7 277/285  
:BLT:SWISS 21->307 FIEF_SALSV 1e-66 49.0 %
:TM
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID ABA59317.1 GT:GENE ABA59317.1 GT:PRODUCT Cation efflux protein GT:DATABASE GIB00281CH01 GT:ORG noce0 GB:ACCESSION GIB00281CH01 GB:LOCATION complement(3251695..3252648) GB:FROM 3251695 GB:TO 3252648 GB:DIRECTION - GB:PRODUCT Cation efflux protein GB:PROTEIN_ID ABA59317.1 GB:DB_XREF GI:76884636 InterPro:IPR002524 LENGTH 317 SQ:AASEQ MKAQTENKLKKAIFPSETVLISRDHARITQRATYAAVSVAVILVVIKLGAYLVTGSVAMLSALIDSALDVAASLINVFAVRTALTPADREHRFGHGKAEPLAGLGQAAFITGSALFLAVESIRLLWVPQPVENGALGIGVMGVSTMLTLALVYYQRGVIRKTGSLAISADSLHYTGDVLVNLGVIAAIGLSTLGGWTLADPLFALGIAAYILWTAWQIIFRSLDQLMDRELPEEKRAQITQLALSHPEVLDFHDLRTRAAGQNIFIQFHLGVDGQLSLYRAHRIGKEVEAKVLNIFPQAEIIIHQDPIDKDKEDSLG GT:EXON 1|1-317:0| BL:SWS:NREP 1 BL:SWS:REP 21->307|FIEF_SALSV|1e-66|49.0|286/300| TM:NTM 6 TM:REGION 36->58| TM:REGION 66->88| TM:REGION 104->126| TM:REGION 137->159| TM:REGION 168->190| TM:REGION 198->220| SEG 35->46|aavsvavilvvi| BL:PDB:NREP 1 BL:PDB:REP 47->307|2qfiA|3e-64|47.3|260/286| RP:PDB:NREP 1 RP:PDB:REP 227->312|3byrA|5e-16|36.0|86/89| RP:PFM:NREP 1 RP:PFM:REP 47->288|PF01545|1e-26|35.5|242/282|Cation_efflux| HM:PFM:NREP 1 HM:PFM:REP 35->311|PF01545|4.8e-63|30.7|277/285|Cation_efflux| GO:PFM:NREP 4 GO:PFM GO:0006812|"GO:cation transport"|PF01545|IPR002524| GO:PFM GO:0008324|"GO:cation transmembrane transporter activity"|PF01545|IPR002524| GO:PFM GO:0016020|"GO:membrane"|PF01545|IPR002524| GO:PFM GO:0055085|"GO:transmembrane transport"|PF01545|IPR002524| RP:SCP:NREP 2 RP:SCP:REP 25->229|2qfiA2|5e-36|44.6|204/204|f.59.1.1| RP:SCP:REP 219->312|1dq8A1|5e-18|17.0|94/117|d.58.20.1| OP:NHOMO 955 OP:NHOMOORG 753 OP:PATTERN --1-------------2-1111-111111111111111111111212-2266411211112---1--1 122--1-----1-1-1-11-11--1-11111-3111-111------1-----1-1--------1--11--1--------11-1-11111111-111---121-1-11111---------------111121121-11111111121311111111111111111111112-------------112111113132222223222322231222212222431111322222331111111111111112222111-1111111-----------1-1111111111111111111111111111-1111-11111-111111112135111112112112112122121--21-11111211111111111--11-11131111111122112111111111-111111-111111111121111112121111121-12-21111-1-1111111111111511---1------1111111111111111-11-211-------111111211111111111111121121--12611111212121-1111---11------1-1-1131112-111111222-2111121111111122211111111111---------1122222221-1-111111111111111111111111--11-11------21112221111111111-111111111111111111132212--12121222222222212211111111-111111111111----11111222221--11111111----1111----------1-1112121212222211111111111111111111211111211111111111111113---------------1-1-------------------------1211111111111 ----11--------------111-----------------------1--------------------------------------------------1-----2----21------------------------------------------------------------1--1-1--16111--2134-32----1-1 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 265 STR:RPRED 83.6 SQ:SECSTR ##############################################TTcccccTTcccccccccTTHHHHHHHHHHHHHHTTccccccTTccccccTHHHHHHHTTTTTTcccTTGGGcccTTccTTTccccTTTccccccGGGcccGGGGTTTHHHHGGGcccTTcGGGGGGHHHHTccccTTcccTTcccc#cTTccccccHHHHTTTTTTTTTTHHHHTGGGcccccccHHHHHHHHHHHHHHTTccEEEEEEEEEETTEEEEEEEEEccTTccHHHHHHHHHHHHHHHHHHcTTEEEEEEEEcGGGcc##### DISOP:02AL 1-8, 13-28, 310-317| PSIPRED ccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHcccccEEEEEEEEEEccEEEEEEEEEEcccccHHHHHHHHHHHHHHHHHHccccEEEEEEcccccccccccc //