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Nitrosococcus oceani ATCC 19707 (noce0)
Gene : ABA59348.1
DDBJ      :             Transposase
Swiss-Prot:             

Homologs  Archaea  36/68 : Bacteria  137/915 : Eukaryota  0/199 : Viruses  1/175   --->[See Alignment]
g.72.1
:407 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:RPS:PDB   105->198 3ee7B PDBj 9e-07 8.9 %
:RPS:PDB   207->377 3btaA PDBj 1e-05 5.4 %
:RPS:SCOP  303->354 1wj0A  g.72.1.1 * 2e-11 17.3 %
:RPS:PFM   156->274 PF01385 * Transposase_2 1e-05 33.9 %
:RPS:PFM   296->361 PF07282 * Transposase_35 2e-13 48.5 %
:HMM:PFM   296->364 PF07282 * Transposase_35 7.7e-28 42.0 69/69  
:HMM:PFM   112->276 PF01385 * Transposase_2 5.3e-21 24.7 162/227  
:BLT:SWISS 156->365 YDCM_ECOLI 1e-20 32.5 %

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID ABA59348.1 GT:GENE ABA59348.1 GT:PRODUCT Transposase GT:DATABASE GIB00281CH01 GT:ORG noce0 GB:ACCESSION GIB00281CH01 GB:LOCATION complement(3281342..3282565) GB:FROM 3281342 GB:TO 3282565 GB:DIRECTION - GB:PRODUCT Transposase GB:PROTEIN_ID ABA59348.1 GB:DB_XREF GI:76884667 InterPro:IPR001959 InterPro:IPR010095 LENGTH 407 SQ:AASEQ MKEIVRTTLIKVDLPFEAAKNTVIAWTEACNAVSCRAFENGKLSNAIKLQQLCYETAKSFGLSSQVAVSCIRQVASKYAAARTAKKTLSKPVYFRPCAVVLQGGKRGRDFSFTQQGLSVWTVNGRIKSLVYHGAPKLQAYVANWRLGDGRLFVRKGKVFLSVSFKHEAETISKPNDAVVGVDRGIKVLATVTDGQRQLFFGGGHTHHVRHRYAKTRASLQKKKARTGSRSTRRVLKRLSGRERRFMRNINHVMSRHLVDFARDTGNPTIAVEDLGGIRNGRRLRKQQRTDLNRWAFYELEQFIRYKADTFGMEVIGVDPKHTSQGCSRCGHTEKANRHQRRFLCKACGYELHADLNASRNIRLRGVLARQVLDEDGVLSITPEARPVDPGSKPGEGTGKPLALASGH GT:EXON 1|1-407:0| BL:SWS:NREP 1 BL:SWS:REP 156->365|YDCM_ECOLI|1e-20|32.5|206/402| RP:PDB:NREP 2 RP:PDB:REP 105->198|3ee7B|9e-07|8.9|90/115| RP:PDB:REP 207->377|3btaA|1e-05|5.4|148/1277| RP:PFM:NREP 2 RP:PFM:REP 156->274|PF01385|1e-05|33.9|112/207|Transposase_2| RP:PFM:REP 296->361|PF07282|2e-13|48.5|66/70|Transposase_35| HM:PFM:NREP 2 HM:PFM:REP 296->364|PF07282|7.7e-28|42.0|69/69|Transposase_35| HM:PFM:REP 112->276|PF01385|5.3e-21|24.7|162/227|Transposase_2| RP:SCP:NREP 1 RP:SCP:REP 303->354|1wj0A|2e-11|17.3|52/58|g.72.1.1| OP:NHOMO 679 OP:NHOMOORG 174 OP:PATTERN ----1-11723732DC-2------89A6E8KI----12----------13114112--214-144--- ---------------------1----------------43---5------------------1----11------2----------22--------------------6---------------------------2-11------13F-63PCs----------V-5C11-------------5------2C--1-1152-----122------1-2W9---7-------1----------------------1-------6-----1--1---------------------------------------------------2----------2-4--111-2-G-2--1----211-1----1-22-4----------------------------------------------1--------------------------------11111111---------------------------------------------------------------------1-----------------81----------------------1---------------------------------------------1--1----------2-----2----2---------2------------17-------------2--12221-1-32-22142113132-2111111-------B---1-------1-11-21111223--------------------------------------------44-----------5--------------------------------------------------------------------------------------------------------42-61846--- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- --------------------------------------1---------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 238 STR:RPRED 58.5 SQ:SECSTR ########################################################################################################EccTTTcccEEEEEEEEccccEE#EEEEEccccccE##EEEEcTTccccccEEEEEccTTccEEEEEEEcTT#ccHHHHHHHHHHHHccccccc########ccccEEEE#cccccccccEEEEEEETTEEEEEEEcccccGGGccccccccccccccc#######cccT##TTTccHHHHHHHHHHHHHHTcHHHHHHH#HHHHccccccTTccTTcccccGGGEE#####EEEcTTcc######EEEEEc#cEEEEEccccTTccEEEccc############################## DISOP:02AL 217-231, 374-407| PSIPRED cccEEEEEEEEEEccHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccEEEEEcccEEEEEEccEEEEEEccccHHHEEEccccEEEEEEEEEEccEEEEEEEEEccccccccccccEEEEEccccEEEEEEcccEEEEccccHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccEEEEEccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccEEEEEcccccccccccccEEEcccccccEEEEccccEEEEcHHHHHHHHHHHHHccccccccccccccccccccccccccccccccccccccccc //