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Nitrosococcus oceani ATCC 19707 (noce0)
Gene : ABA59391.1
DDBJ      :             putative DNA-binding protein
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  26/915 : Eukaryota  0/199 : Viruses  0/175   --->[See Alignment]
:187 amino acids
:PSIPRED
:DISOPRED
:HMM:PFM   85->130 PF05930 * Phage_AlpA 1.4e-05 29.5 44/51  
:HMM:PFM   8->58 PF11476 * TgMIC1 2.5e-05 36.7 49/137  
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID ABA59391.1 GT:GENE ABA59391.1 GT:PRODUCT putative DNA-binding protein GT:DATABASE GIB00281CH01 GT:ORG noce0 GB:ACCESSION GIB00281CH01 GB:LOCATION complement(3333342..3333905) GB:FROM 3333342 GB:TO 3333905 GB:DIRECTION - GB:PRODUCT putative DNA-binding protein GB:PROTEIN_ID ABA59391.1 GB:DB_XREF GI:76884710 LENGTH 187 SQ:AASEQ MQEYEFTLKFRLENSSENPEVYLAALEAAGCDDAAVGLGQHGRIALNFTRSAQSAADAVSSAIFSVQKAIPGSRLVEATPDYVGITDVAEMFGFSRQHMRQLIVANEADFPQPAHEGKPSIWHLSHILQWFREHEARRFQDDVYEISAVNMQINTYIAFRAMPTPLKENLVNFQLSSKLETVVSSLN GT:EXON 1|1-187:0| SEG 23->35|laaleaagcddaa| SEG 51->62|saqsaadavssa| HM:PFM:NREP 2 HM:PFM:REP 85->130|PF05930|1.4e-05|29.5|44/51|Phage_AlpA| HM:PFM:REP 8->58|PF11476|2.5e-05|36.7|49/137|TgMIC1| OP:NHOMO 26 OP:NHOMOORG 26 OP:PATTERN -------------------------------------------------------------------- ----------------------------------------------------------------------------------------------------------------------------------------------------1-11-----------1----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1--------------------------------------------------------------------------------111------1-------1---------1-111---------11---------------------------------------------------------------------------------------------1-------------------------1------------1------------------------------------------------------------------------------------------------1-------------------------------11--1--------------------------------11----1------------------------------------------------------------------ ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- DISOP:02AL 186-188| PSIPRED cccEEEEEEEEEccccccHHHHHHHHHcccccccEEEEccccEEEEEEEcccccHHHHHHHHHHHHHHHccccEEEEcccccccHHHHHHHHcccHHHHHHHHHccccccccccccccccHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHccHHHHcccccccHHHHHHHHHHHcc //