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Nitrosococcus oceani ATCC 19707 (noce0)
Gene : ABA59415.1
DDBJ      :             conserved hypothetical protein
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  45/915 : Eukaryota  0/199 : Viruses  0/175   --->[See Alignment]
f.4.3
:490 amino acids
:PSIPRED
:DISOPRED
:HMM:SCOP  140->490 1phoA_ f.4.3.1 * 2.2e-27 19.3 %
:HMM:PFM   29->101 PF12325 * TMF_TATA_bd 0.0002 25.7 70/121  
:BLT:SWISS 103->466 Y1259_AQUAE 4e-64 41.5 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID ABA59415.1 GT:GENE ABA59415.1 GT:PRODUCT conserved hypothetical protein GT:DATABASE GIB00281CH01 GT:ORG noce0 GB:ACCESSION GIB00281CH01 GB:LOCATION complement(3358923..3360395) GB:FROM 3358923 GB:TO 3360395 GB:DIRECTION - GB:PRODUCT conserved hypothetical protein GB:PROTEIN_ID ABA59415.1 GB:DB_XREF GI:76884734 LENGTH 490 SQ:AASEQ MRKKESLVGVGLAALTLAVSLPLGATEMPQTMEEMWRIIQQQQQEIEALKAKSQPLETEKAHPEISKEVPEKTKEATKTTTSTSEENAETKAQVKELEHKTGVLAEAVESLRTAMHIPEEFEYKSMYGLGPAASKVYQVGKGLSIGGYGEGRYQTFVNGDGDDNADFARLVLYTGYKFTDRIIFNSEIEFEHGTTGEGAEEKGEVSVEFAALDFFLDPRVNIRAGLVLMPMGFINLIHEPPFFFGNNRPEVERRIIPSTWREIGVGLFGELLPGLTYTMYGVNGLNAEEFSSRGIRDGRQSGSKALAEDLAFVGRMDYAPPGMPGLSFGGSAYAGNSGQDQSYGGQDLDVFTQLYEGHLQWQYRGWWLRALGAWGHIGDAEALSAAKGETIGESNFGWYTELAYNLLPLVWPETIQYLAPFFRFEQLNTIASAPAGFSDKGGINQDIYQVGINYKPIPNVVIKADYRNFVGRDGNPSAADEFNLGLGFIF GT:EXON 1|1-490:0| BL:SWS:NREP 1 BL:SWS:REP 103->466|Y1259_AQUAE|4e-64|41.5|352/100| SEG 6->21|slvgvglaaltlavsl| SEG 38->47|iiqqqqqeie| SEG 71->92|ektkeatktttstseenaetka| SEG 189->204|efehgttgegaeekge| HM:PFM:NREP 1 HM:PFM:REP 29->101|PF12325|0.0002|25.7|70/121|TMF_TATA_bd| HM:SCP:REP 140->490|1phoA_|2.2e-27|19.3|311/0|f.4.3.1|1/1|Porins| OP:NHOMO 53 OP:NHOMOORG 45 OP:PATTERN -------------------------------------------------------------------- -----------------------------------------------------------------------------------1-111--11-1--------11--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------11-------------------------------------------------------------------------------------------------------------------------------------------------111--------------1---------------------------------111-1-1--1111-1----------------------1--11-------12----1111-221----2-22-22---1---------------------------------------------------------------------------------------------------------1---------------------------------------------------------1--------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- DISOP:02AL 1-5, 60-104| PSIPRED cccHHHHHHHHHHHHHHHHHccHHHHHccHHHHHHHHHHHHHHHHHHHHHHccccccHHHccHHHHHHHHHHHccccccccccHHHHcccHHHHccccccccccHHHHHHccccccccccccccccccccccHHHHHHHHcccEEEEEEEEcccccccccccccEEHEEEEEEEccEEcccEEEEEEEEEEEccccccccccccEEEEEEEEEEEEccccEEEEEEEEccEEEEHHcccccEEcccccccHHHcEEcccEEEcccEEEEcccccccEEEEEEEcccccccccccEEcccccccccccccccEEEEEEEEccccccEEEEEEEEEEccccccccccEEccEEEEEEEEEEEEEcccEEEEEEEEEEcccccccccccccccccccccEEEEEEEEEEccccccccccEEEEEEEEEEEcccccccccccccccccEEEEEEEEEEEEcccEEEEEEEEEEEcccccccccccccEEEEEEc //