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Nitrosococcus oceani ATCC 19707 (noce0)
Gene : ABA59450.1
DDBJ      :             Uroporphyrinogen decarboxylase HemE
Swiss-Prot:DCUP_NITOC   RecName: Full=Uroporphyrinogen decarboxylase;         Short=URO-D;         Short=UPD;         EC=4.1.1.37;

Homologs  Archaea  11/68 : Bacteria  695/915 : Eukaryota  182/199 : Viruses  0/175   --->[See Alignment]
c.1.22
:357 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   3->353 3cyvA PDBj e-143 67.8 %
:RPS:PDB   5->350 2ejaB PDBj 7e-76 39.7 %
:RPS:SCOP  2->353 1jphA  c.1.22.1 * e-148 49.7 %
:HMM:SCOP  1->354 1uroA_ c.1.22.1 * 1.1e-130 50.9 %
:RPS:PFM   7->348 PF01208 * URO-D e-109 59.3 %
:HMM:PFM   5->347 PF01208 * URO-D 1.2e-142 53.6 336/343  
:BLT:SWISS 1->357 DCUP_NITOC 0.0 100.0 %
:PROS 22->31|PS00906|UROD_1
:PROS 142->158|PS00907|UROD_2

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID ABA59450.1 GT:GENE ABA59450.1 GT:PRODUCT Uroporphyrinogen decarboxylase HemE GT:DATABASE GIB00281CH01 GT:ORG noce0 GB:ACCESSION GIB00281CH01 GB:LOCATION complement(3400559..3401632) GB:FROM 3400559 GB:TO 3401632 GB:DIRECTION - GB:PRODUCT Uroporphyrinogen decarboxylase HemE GB:PROTEIN_ID ABA59450.1 GB:DB_XREF GI:76884769 InterPro:IPR000257 InterPro:IPR006361 LENGTH 357 SQ:AASEQ MAELKNDRFLRALLRQPVDRTPIWIMRQAGRYLPEYREVRAKAGDFLTLCTTPELACEVTLQPLRRFDLDAAIIFSDILTIPHAMGLGLYFSKGEGPRFERPVRTKNQVSALGVPDPESDLSYVMEALRLTRRELDGRVPLIGFSGSPWTLACYMVEGGSSKDFALIKGLMFEHPQVMHHLLEILAQAVTVYLNAQIAAGAQAVMLFDTWGGALSHRDYRDFSLSYMARIVEGVVRENEGRQVPVILFTKGGGLWLETMAGTGCDALGVDWTVDLAKARMQVGKQVALQGNMDPCVLYASSERVRQEASEIIKAYGAGSGHVFNLGHGIHPTVMPEKVAALVDAVHELSVPYHTYEE GT:EXON 1|1-357:0| SW:ID DCUP_NITOC SW:DE RecName: Full=Uroporphyrinogen decarboxylase; Short=URO-D; Short=UPD; EC=4.1.1.37; SW:GN Name=hemE; OrderedLocusNames=Noc_3008; SW:KW Complete proteome; Cytoplasm; Decarboxylase; Lyase;Porphyrin biosynthesis. SW:EXACT T SW:FUNC + BL:SWS:NREP 1 BL:SWS:REP 1->357|DCUP_NITOC|0.0|100.0|357/357| GO:SWS:NREP 4 GO:SWS GO:0005737|"GO:cytoplasm"|Cytoplasm| GO:SWS GO:0016831|"GO:carboxy-lyase activity"|Decarboxylase| GO:SWS GO:0016829|"GO:lyase activity"|Lyase| GO:SWS GO:0006779|"GO:porphyrin biosynthetic process"|Porphyrin biosynthesis| PROS 22->31|PS00906|UROD_1|PDOC00705| PROS 142->158|PS00907|UROD_2|PDOC00705| BL:PDB:NREP 1 BL:PDB:REP 3->353|3cyvA|e-143|67.8|351/352| RP:PDB:NREP 1 RP:PDB:REP 5->350|2ejaB|7e-76|39.7|335/336| RP:PFM:NREP 1 RP:PFM:REP 7->348|PF01208|e-109|59.3|334/339|URO-D| HM:PFM:NREP 1 HM:PFM:REP 5->347|PF01208|1.2e-142|53.6|336/343|URO-D| GO:PFM:NREP 2 GO:PFM GO:0004853|"GO:uroporphyrinogen decarboxylase activity"|PF01208|IPR000257| GO:PFM GO:0006779|"GO:porphyrin biosynthetic process"|PF01208|IPR000257| RP:SCP:NREP 1 RP:SCP:REP 2->353|1jphA|e-148|49.7|350/357|c.1.22.1| HM:SCP:REP 1->354|1uroA_|1.1e-130|50.9|352/0|c.1.22.1|1/1|UROD/MetE-like| OP:NHOMO 1032 OP:NHOMOORG 888 OP:PATTERN -----------------------------1--------1111-------11-1--------111---- 1111111111111111111-111111111111111111111111111111111111111111111111111----------2-1111111-1-------111111111111111111111111111111111111111111---1111111111111111111111111111111111111111-111---11111111111111111111111111111111111111111111111111111111111111---------------------------------------------------------------------------1111111-1-----------1------------1--13-------1111111-----111111111111111111111111-1111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111--1----------131111111111111--111111111111111111111111111111111111111111111111111111111--11111------11111111111111111-11111111111111111111111111111111111111111111111111111111111111111--1111111111111111111111-----11111111111111111111111111111111111111111111111111111111111111111111111111-111111-----------------------------------------------1- 11--111-1---11111111111111111-11111112211111111111111111111111111111-1111111112111111111-11111111111111111-13-231111--111111111315F1-3111111111111111111-111112111131112132--222234w4443333541423321113 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 353 STR:RPRED 98.9 SQ:SECSTR GGcccccHHHHHHTTccccccccccTTcccTTcHHHHHHHTTcccHHHHHHcHHHHHHHHHHHHHHHccccEEccccTTGGGGGGTcEEEEETTTEEEEEccccGGGHGGGcccccGGGGGHHHHHHHHHHHHHccccccEEEEEEcHHHHHHHHHTTTcccccHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHHHTTccEEEEEETTGGGccHHHHHHHTHHHHHHHHHHHHHHcTTEcccEEEEEccHHHHHHHHTTccccEEEccTTccHHHHHHHcccTccEEccccGGGGGccHHHHHHHHHHHHTTccccccEEccccccccTTccHHHHHHHHHHHHTcccGGG#### DISOP:02AL 1-2, 352-357| PSIPRED ccccccHHHHHHHccccccccccHHHHHcccHHHHHHHHHHHcccHHHHHccHHHHHHHHHHHHHHccccEEEEcHHHHHHHHHcccEEEEEcccccccccccccHHHHHccccccccHHHHHHHHHHHHHHHHcccccEEEEEcccHHHHHHHHHcccccccHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHccccEEEEEccccccccHHHHHHHHHHHHHHHHHHHHHHccccccEEEEEccccHHHHHHHHHccccEEEccccccHHHHHHHHcccEEEEccccHHHccccHHHHHHHHHHHHHHHcccccEEEEccccccccccHHHHHHHHHHHHHHccccccccc //