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Nitrosococcus oceani ATCC 19707 (noce0)
Gene : ABA59454.1
DDBJ      :             SMF protein
Swiss-Prot:             

Homologs  Archaea  2/68 : Bacteria  805/915 : Eukaryota  2/199 : Viruses  0/175   --->[See Alignment]
c.129.1
:368 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:RPS:PDB   107->254 2a33B PDBj 1e-20 8.8 %
:RPS:PDB   306->367 1biaA PDBj 2e-04 14.5 %
:RPS:SCOP  97->284 1wekA  c.129.1.1 * 1e-27 14.9 %
:HMM:SCOP  75->284 1wekA_ c.129.1.1 * 8.2e-48 38.9 %
:RPS:PFM   74->272 PF02481 * DNA_processg_A 4e-51 55.3 %
:HMM:PFM   68->273 PF02481 * DNA_processg_A 1.4e-80 54.9 206/212  
:BLT:SWISS 49->361 SMF_ECOLI 1e-56 44.8 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID ABA59454.1 GT:GENE ABA59454.1 GT:PRODUCT SMF protein GT:DATABASE GIB00281CH01 GT:ORG noce0 GB:ACCESSION GIB00281CH01 GB:LOCATION complement(3405155..3406261) GB:FROM 3405155 GB:TO 3406261 GB:DIRECTION - GB:PRODUCT SMF protein GB:PROTEIN_ID ABA59454.1 GB:DB_XREF GI:76884773 InterPro:IPR003488 LENGTH 368 SQ:AASEQ MDERAYWLALHRAPGVGSVSFCRLLEKYGSPTALFTSPERLAGLSDGIQHYLRQPDWKAVEQDLKWLEQPDHYLLTLADPGYPPLLREIPDPPPILFVHGDPSLLSLPQLAIVGSRNPSPAGAETAAQFATYLANSGLVISSGLALGIDAAAHEGALAAKAATIAVAGTGLDRVYPARHHALAHAIAESGALVSEFPIGTPPLPQNFPRRNRLISGLSWGILVVEAALQSGSLITARLGAEQGREIFAIPGSIHNPLARGCHHLIREGAKLVEAAQDIWEELGSLAGAIPNLQCQEAPQKIEASTDDLEYQLLLDCLGYDPLPIDLLVERCGLTAEAVSSMLLILELQGRITALPGGRYLRCGKEGQS GT:EXON 1|1-368:0| BL:SWS:NREP 1 BL:SWS:REP 49->361|SMF_ECOLI|1e-56|44.8|306/374| SEG 83->96|ppllreipdpppil| SEG 150->167|aaahegalaakaatiava| RP:PDB:NREP 2 RP:PDB:REP 107->254|2a33B|1e-20|8.8|148/170| RP:PDB:REP 306->367|1biaA|2e-04|14.5|62/292| RP:PFM:NREP 1 RP:PFM:REP 74->272|PF02481|4e-51|55.3|199/209|DNA_processg_A| HM:PFM:NREP 1 HM:PFM:REP 68->273|PF02481|1.4e-80|54.9|206/212|DNA_processg_A| GO:PFM:NREP 1 GO:PFM GO:0009294|"GO:DNA mediated transformation"|PF02481|IPR003488| RP:SCP:NREP 1 RP:SCP:REP 97->284|1wekA|1e-27|14.9|168/208|c.129.1.1| HM:SCP:REP 75->284|1wekA_|8.2e-48|38.9|190/0|c.129.1.1|1/1|MoCo carrier protein-like| OP:NHOMO 846 OP:NHOMOORG 809 OP:PATTERN ----------------------------------------------1--------1------------ 111-111111111111111-11--1-111111111111111111111111211111-11111311111121111121111121111111112-1111--11111111111--------------11111111111111111111111111111111111111111111111-----------111111111111-----11111121211111111111111111111111111111111111--111-111111111111111111111111111-111111111111111111111111111111111111111111111112111111111112111111111111111111111311111111111121111111111111111111211111111111111112-11111111111-1111111111111111111212111112222222211111111111111111111--11-11------1-11-131111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111-11111111111111111111111-11111111211111111111111111111111111--11111------12111111111111211-11111211-11111111111111111111-111111111111111111111--111111121111---11111121111121111111111111111111111-111111111111111111111111----11--11111111111111111111111111111--11111111111111-111--------------------------1111111111111 --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------2-----1---- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 309 STR:RPRED 84.0 SQ:SECSTR ###########################cccTTTcTTcTTcEEEEEEETTEEEEEEETTEEcHHHHHHHHHHHHHHHHHHHHccHHHHHHccHHHHHHHHHHHHHHTccEEEEEccccccccHHHHHHHHHHHHHHTTcEEEEcccccHHHHHHHHHHHTTccEEEEEEccccccEEEEEccHHHHHHHTccEEEEccccHHHHHHHHHHHHHHHTTcccccEEEEcGTTHHHHHHHHHHHHTTcccHHHHTTEEEEEcGGGHHHHHHHHHHHHH###############################cHHHHHHHHHHTTcccccHHHHHHHHTccHHHHHHHHHHHHHTTcccEEETTTEEEcccccc# DISOP:02AL 291-306, 366-368| PSIPRED cHHHHHHHHHHHcccccHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHcccEEEEEccHHHHHHHHHcccccEEEEEEccHHHHHcccEEEEEcccccHHHHHHHHHHHHHHHHcccEEEEcccccHHHHHHHHHHHccccEEEEEcccccccccHHHHHHHHHHHHcccEEEEcccccccccccHHHHHHHHHHHHccEEEEEcccccccHHHHHHHHHcccEEEEEccccccHHHcccHHHHHcccEEEccHHHHHHHHHHHHHcccccccccccccccccccccHHHHHHHHcccccccHHHHHHHHcccHHHHHHHHHHHHHccccEEccccEEEEccccccc //