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Nitrosococcus oceani ATCC 19707 (noce0)
Gene : ABA59485.1
DDBJ      :             Cytochrome c oxidase, subunit III
Swiss-Prot:             

Homologs  Archaea  21/68 : Bacteria  561/915 : Eukaryota  56/199 : Viruses  0/175   --->[See Alignment]
f.25.1
:288 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   1->287 1occC PDBj 2e-45 39.3 %
:RPS:PDB   217->268 2dysC PDBj 7e-09 32.7 %
:RPS:SCOP  8->287 1m56C  f.25.1.1 * 2e-44 38.6 %
:HMM:SCOP  1->289 1qleC_ f.25.1.1 * 2.7e-81 43.4 %
:RPS:PFM   50->288 PF00510 * COX3 7e-41 51.2 %
:HMM:PFM   8->103 PF00510 * COX3 7.5e-23 32.3 96/258  
:HMM:PFM   146->287 PF00510 * COX3 2.6e-53 50.0 138/258  
:BLT:SWISS 8->287 COX3_PROWI 3e-47 42.8 %
:TM
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID ABA59485.1 GT:GENE ABA59485.1 GT:PRODUCT Cytochrome c oxidase, subunit III GT:DATABASE GIB00281CH01 GT:ORG noce0 GB:ACCESSION GIB00281CH01 GB:LOCATION complement(3439170..3440036) GB:FROM 3439170 GB:TO 3440036 GB:DIRECTION - GB:PRODUCT Cytochrome c oxidase, subunit III GB:PROTEIN_ID ABA59485.1 GB:DB_XREF GI:76884804 InterPro:IPR000298 LENGTH 288 SQ:AASEQ MAHAHGEYYQPQPSYWPLIASFALFSMAASFTAYLNGVEIGKYLLIAAIGVLFFMMYGWFREVIRESEAGLYNEQVDRSFRWGMIWFIISEIFFFAAFFGALYYTRDLTLPWLLGEGAKGVAHTFLWPEFTEVWPTNGPQSVGGEFETMAAWGIPAINTLILLTSGVTVTWAHWGLKKDNRQQLIIGLFLTVALGFTFVGLQIYEYGHAMDELNLRFSSGIYGSLFYMLTGFHGFHVTVGSIMLLVVLFRSLAGHFTPKHHFAFEGVAWYWHFVDVVWLGLFIFVYWL GT:EXON 1|1-288:0| BL:SWS:NREP 1 BL:SWS:REP 8->287|COX3_PROWI|3e-47|42.8|250/262| TM:NTM 7 TM:REGION 14->36| TM:REGION 44->66| TM:REGION 81->103| TM:REGION 149->171| TM:REGION 183->205| TM:REGION 235->257| TM:REGION 267->288| SEG 20->33|asfalfsmaasfta| SEG 87->101|fiiseifffaaffga| BL:PDB:NREP 1 BL:PDB:REP 1->287|1occC|2e-45|39.3|257/261| RP:PDB:NREP 1 RP:PDB:REP 217->268|2dysC|7e-09|32.7|52/258| RP:PFM:NREP 1 RP:PFM:REP 50->288|PF00510|7e-41|51.2|211/212|COX3| HM:PFM:NREP 2 HM:PFM:REP 8->103|PF00510|7.5e-23|32.3|96/258|COX3| HM:PFM:REP 146->287|PF00510|2.6e-53|50.0|138/258|COX3| GO:PFM:NREP 3 GO:PFM GO:0004129|"GO:cytochrome-c oxidase activity"|PF00510|IPR000298| GO:PFM GO:0006123|"GO:mitochondrial electron transport, cytochrome c to oxygen"|PF00510|IPR000298| GO:PFM GO:0016020|"GO:membrane"|PF00510|IPR000298| RP:SCP:NREP 1 RP:SCP:REP 8->287|1m56C|2e-44|38.6|254/265|f.25.1.1| HM:SCP:REP 1->289|1qleC_|2.7e-81|43.4|265/273|f.25.1.1|1/1|Cytochrome c oxidase subunit III-like| OP:NHOMO 938 OP:NHOMOORG 638 OP:PATTERN 11----1111111111--1-----21111111------------------------------------ 1231111111111111111-14111111111121121111111111111111211111111111112111-----------------------------------121-2--------------11-------------11---1-1321111111121212221115331111111112112--------22211111111111111122222211112212111111112211111111111111111111--------------------------------------------------------------------------------------------------1---------------------1--122111111115333211122133333333333-223224233311322233333333211111121111121--------1111211-111111111111111111111111-111111112-1323432222322333223533332334446551144422222112131321222121-------1133141-----11---111-------1--221211-----------------------------1112115122111222321222221122121--11-1------11111111111111111-11111111111111111111111111-1111111111111111111-11111-111111111111-11111111111112111---------------1111111---1122222322122222111-11-11111-1--3-----221113322222222111111--111111-----------------------------------------------2- -3------1--------1---------111-11111-------2-1--------121-----1-111---1-----1----------------1---11----111------11111-----1-21-1-15--11-----1--21--------1-1-------1-112--A-1--1------------2-1---2---- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 286 STR:RPRED 99.3 SQ:SECSTR cccccccccccccccHHHHHHHHHHHHHHHHHHHHHHcccHTHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcHHHHHHH#HHcccHHHGGGTcccccTTTcTcccccccccTTTHHHHHHHHHHHHHHHHHHHHHHHHTTcHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccTTcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTcccccccHHHHHHHHHHHHHHHHHHHHHHHHTT# DISOP:02AL 1-4| PSIPRED cccccccccccccccHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHc //