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Nitrosococcus oceani ATCC 19707 (noce0)
Gene : ABA59490.1
DDBJ      :             Cytochrome c, class I
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  187/915 : Eukaryota  1/199 : Viruses  0/175   --->[See Alignment]
a.3.1
:113 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   24->104 1m6zA PDBj 1e-17 54.3 %
:RPS:PDB   24->101 1cnoA PDBj 2e-18 56.4 %
:RPS:SCOP  30->103 1fcdC1  a.3.1.4 * 3e-24 29.7 %
:HMM:SCOP  21->102 1h1oA2 a.3.1.4 * 8.4e-24 46.9 %
:HMM:PFM   28->102 PF00034 * Cytochrom_C 1.9e-13 34.7 75/91  
:BLT:SWISS 18->104 CYC4_PSEST 5e-18 52.9 %
:TM
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID ABA59490.1 GT:GENE ABA59490.1 GT:PRODUCT Cytochrome c, class I GT:DATABASE GIB00281CH01 GT:ORG noce0 GB:ACCESSION GIB00281CH01 GB:LOCATION complement(3444274..3444615) GB:FROM 3444274 GB:TO 3444615 GB:DIRECTION - GB:PRODUCT Cytochrome c, class I GB:PROTEIN_ID ABA59490.1 GB:DB_XREF GI:76884809 InterPro:IPR003088 InterPro:IPR008169 LENGTH 113 SQ:AASEQ MLRWWLFLLAPVFAVLVSGSVLAAGDPAAGKQKSQACAACHGPDGNSPAPQFPKLAGQYAGYLVHALTAYQVGDRTDPVMQPMAASLSEQDKEDLAAYYASQTGLTLPWKTGR GT:EXON 1|1-113:0| BL:SWS:NREP 1 BL:SWS:REP 18->104|CYC4_PSEST|5e-18|52.9|87/210| TM:NTM 1 TM:REGION 5->26| SEG 6->17|lfllapvfavlv| BL:PDB:NREP 1 BL:PDB:REP 24->104|1m6zA|1e-17|54.3|81/190| RP:PDB:NREP 1 RP:PDB:REP 24->101|1cnoA|2e-18|56.4|78/86| HM:PFM:NREP 1 HM:PFM:REP 28->102|PF00034|1.9e-13|34.7|75/91|Cytochrom_C| RP:SCP:NREP 1 RP:SCP:REP 30->103|1fcdC1|3e-24|29.7|74/80|a.3.1.4| HM:SCP:REP 21->102|1h1oA2|8.4e-24|46.9|81/0|a.3.1.4|1/1|Cytochrome c| OP:NHOMO 369 OP:NHOMOORG 188 OP:PATTERN -------------------------------------------------------------------- ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1---1-------121-1-1-1-------------------1-1--------2-1----------1--11111-----------------------------------------------------13332244443213335534444444534123333222212114423223333-1111-------333342---------------------------------------------------------1122-131312211111121211113133112---5411-------1--1-1------------------------------------------------------1---------111111111111---1-----1111313------------------------1111111211221122222------------1233122222322222222223323----11--------------------------------------------------------- --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1---- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 93 STR:RPRED 82.3 SQ:SECSTR #################cGcccccccHHHHHHHGGGTHHHHcTTcccccTTccccTTccHHHHHHHHHHHHTTccccTHHHHHHTTccHHHHHHHHHHHHHHHHHHHHHH### DISOP:02AL 105-113| PSIPRED cHHHHHHHHHHHHHHHHHcccHHcccHHHHHHHHHHHHHHcccccccccccccccccccHHHHHHHHHHHHcccccccccHHHHHcccHHHHHHHHHHHHHcccccccccccc //