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Pyrobaculum aerophilum str. IM2 (paer1)
Gene : AAL62535.1
DDBJ      :             translation initiation factor aIF-2 gamma subunit, putative
Swiss-Prot:             

Homologs  Archaea  68/68 : Bacteria  229/915 : Eukaryota  195/199 : Viruses  0/175   --->[See Alignment]
b.43.3b.44.1c.37.1
:411 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   10->404 2dcuA PDBj 3e-93 46.5 %
:RPS:PDB   10->404 2d74A PDBj 1e-24 42.5 %
:RPS:SCOP  10->176 1n0uA2  c.37.1.8 * 3e-13 23.3 %
:RPS:SCOP  170->198 1f6bA  c.37.1.8 * 7e-04 24.1 %
:RPS:SCOP  247->320 1kjzA1  b.43.3.1 * 9e-08 59.5 %
:RPS:SCOP  321->404 1kjzA2  b.44.1.1 * 3e-19 40.5 %
:HMM:SCOP  9->224 1f60A3 c.37.1.8 * 1.9e-41 36.3 %
:HMM:SCOP  203->315 2ahoA1 b.43.3.1 * 2.1e-33 55.8 %
:HMM:SCOP  316->405 2ahoA2 b.44.1.1 * 4.1e-25 51.7 %
:RPS:PFM   338->403 PF09173 * eIF2_C 4e-11 40.9 %
:HMM:PFM   9->199 PF00009 * GTP_EFTU 6.9e-39 35.8 165/189  
:HMM:PFM   321->403 PF09173 * eIF2_C 7.4e-25 47.0 83/88  
:HMM:PFM   231->310 PF03144 * GTP_EFTU_D2 2.8e-12 26.8 71/74  
:BLT:SWISS 10->404 IF2G_PYRFU 8e-93 46.5 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID AAL62535.1 GT:GENE AAL62535.1 GT:PRODUCT translation initiation factor aIF-2 gamma subunit, putative GT:DATABASE GIB00076CH01 GT:ORG paer1 GB:ACCESSION GIB00076CH01 GB:LOCATION 33561..34796 GB:FROM 33561 GB:TO 34796 GB:DIRECTION + GB:PRODUCT translation initiation factor aIF-2 gamma subunit, putative GB:NOTE Protein synthesis; Translation factors GB:PROTEIN_ID AAL62535.1 GB:DB_XREF GI:18159085 LENGTH 411 SQ:AASEQ MAFVYPDAIVSTAGHVDHGKTQTTYALSGVWVMRHSEEIKKAMTIKLGYTQIGIYDCGEEYYYSDGILQNGKCPNGAEPKLIRRISLLDVPGHEVLVATMVSGAAVVDGALLVVDASQPAPQPQTVEHFAVLDIIGVRHMVVAQNKIDLVTKEKALENYEQIKNFLKGTWAEKAKVVPISALHRVNIDALVTYLAKEIPKREAELGKPALFSVLRSFNVNPPGTAPDKLRGGVLGGTLLRGVLRVGDEIELRPGLKVDKPKPGYQPIYTKVLSIEYSGQKVEEARPGGLVGIMTGLDPALTKADALAGAVVGKPGTLPPVWTAVEVETRPIPRALAEKIEPFKQNEVVLLAVGPATVFGVVQAVKKDAITVALKKAVCAEQGSKVVVIRQVKNRWIVTNYGTLKGGTVALE GT:EXON 1|1-411:0| BL:SWS:NREP 1 BL:SWS:REP 10->404|IF2G_PYRFU|8e-93|46.5|391/411| SEG 101->117|vsgaavvdgallvvdas| SEG 229->246|lrggvlggtllrgvlrvg| BL:PDB:NREP 1 BL:PDB:REP 10->404|2dcuA|3e-93|46.5|391/407| RP:PDB:NREP 1 RP:PDB:REP 10->404|2d74A|1e-24|42.5|388/403| RP:PFM:NREP 1 RP:PFM:REP 338->403|PF09173|4e-11|40.9|66/88|eIF2_C| HM:PFM:NREP 3 HM:PFM:REP 9->199|PF00009|6.9e-39|35.8|165/189|GTP_EFTU| HM:PFM:REP 321->403|PF09173|7.4e-25|47.0|83/88|eIF2_C| HM:PFM:REP 231->310|PF03144|2.8e-12|26.8|71/74|GTP_EFTU_D2| RP:SCP:NREP 4 RP:SCP:REP 10->176|1n0uA2|3e-13|23.3|146/323|c.37.1.8| RP:SCP:REP 170->198|1f6bA|7e-04|24.1|29/176|c.37.1.8| RP:SCP:REP 247->320|1kjzA1|9e-08|59.5|74/117|b.43.3.1| RP:SCP:REP 321->404|1kjzA2|3e-19|40.5|84/89|b.44.1.1| HM:SCP:REP 9->224|1f60A3|1.9e-41|36.3|190/239|c.37.1.8|1/1|P-loop containing nucleoside triphosphate hydrolases| HM:SCP:REP 203->315|2ahoA1|2.1e-33|55.8|113/0|b.43.3.1|1/1|Translation proteins| HM:SCP:REP 316->405|2ahoA2|4.1e-25|51.7|87/0|b.44.1.1|1/1|EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain| OP:NHOMO 562 OP:NHOMOORG 492 OP:PATTERN 11111111111111111111111111111111111111111111111111111221222121111111 -11--1------------------11-------111--------1-1------------------11------------111-1-----------------------------------------------------11-----11-----------11---1--------111111111111--------------------------------------------------------------------------------------------------------------------------------------------111--1111111-1--1---111----11--11111111-111--111---------------1-----1---------------1---1----1---------------11-----------------------------------------------------------------1----1111111111111111111-1111--1-----------1-------------1--------------1111111111111111111111-1111--1111111---------------1-------------------------------1-----------------11---1-1111111111-111111111111111111211---111111111111111111111111111--1-1-111-1111---------------------111111111--1------------11111----11111---------------------------11---------------1--------------------------------------1---------------- 1111111162111111111111111112221111111111111111122211111111111121111111111211111111111111-1211111111111112211122111111121111142131371-3321121111111121121-1-12111111111221121111111181111112331411111111 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 405 STR:RPRED 98.5 SQ:SECSTR ###cccccEEEEEEcTTTTHHHHHHHHHHHHHHGGGccccccccccccEEEEEEEEEETTTccEEcccccccccccEEEEEEEEEEEEEcccHHHHHHHHHHTTTcccEEEEEEETTcccccHHHHHHHHHHHHTTcccEEEEEEcGGGccHHHHHHHHHHHHHHHTTcTTTTccEEEEcTTTTcTHHHHHHHHHHccccccccTTcccEEEEEEEEccccTTcccccccccEEEEEEEEccEETTcEEEEccEEccccccccEEccEEEEEEEEETTEEccEEcccccEEEEEcccHHHHGGGccTTcEEEcTTccccEEEEEEEccEEcccccHHccccccTTcEEEEEETTEEEEEEEEEEccccEEEEEEEEEEccTTcEEEEEEccTTccEEEEEEEccEEEE### DISOP:02AL 1-2, 39-43| PSIPRED cccccccEEEEEEEEEEccHHHHHHHHccHHHHHHHHHHHHHHHccccEEEEEEEEccccHHHccccEEEccEEEEcccccccEEEEEEcccHHHHHHHHHHHHHHccEEEEEEEccccccccHHHHHHHHHHHHcccEEEEEEEccccccHHHHHHHHHHHHHHHHHcccccEEEEEccccccccHHHHHHHcccccccccccccccccEEEEEEEEccccccccccccccEEEEEEEEEEEEEccEEEEEEccEEEEcccccccEEEEEEEEEEcccccccccccccEEEEEEccccccHHHccccEEEEccccccccEEEEEEEEEEEEEEEcccccccccccEEEEEEEcccEEEEEEEEcccEEEEEEcccEEEccccEEEEEEEEccEEEEEEcEEEEccEEEcc //