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Pyrobaculum aerophilum str. IM2 (paer1)
Gene : AAL62729.1
DDBJ      :             cobalamin biosynthesis putative precorrin-8X methylmutase (precorrin isomerase)
Swiss-Prot:             

Homologs  Archaea  39/68 : Bacteria  243/915 : Eukaryota  0/199 : Viruses  0/175   --->[See Alignment]
c.23.17c.92.1
:317 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   123->312 1f2vA PDBj 5e-22 36.3 %
:RPS:PDB   3->117 2dj5A PDBj 2e-15 24.3 %
:RPS:PDB   126->313 3e7dB PDBj 7e-13 30.1 %
:RPS:SCOP  3->117 1tjnA  c.92.1.3 * 1e-15 24.3 %
:RPS:SCOP  123->312 1f2vA  c.23.17.1 * 2e-49 34.7 %
:HMM:SCOP  3->118 1tjnA_ c.92.1.3 * 2.9e-18 34.5 %
:HMM:SCOP  122->315 1f2vA_ c.23.17.1 * 6.3e-54 40.7 %
:RPS:PFM   8->110 PF01903 * CbiX 2e-06 35.4 %
:RPS:PFM   132->313 PF02570 * CbiC 6e-24 40.7 %
:HMM:PFM   132->314 PF02570 * CbiC 9e-48 39.3 183/198  
:HMM:PFM   8->110 PF01903 * CbiX 1e-18 36.4 99/105  
:BLT:SWISS 3->119 CBIX_METKA 5e-07 33.0 %
:BLT:SWISS 123->312 COBH_PSEDE 2e-21 36.3 %

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID AAL62729.1 GT:GENE AAL62729.1 GT:PRODUCT cobalamin biosynthesis putative precorrin-8X methylmutase (precorrin isomerase) GT:DATABASE GIB00076CH01 GT:ORG paer1 GB:ACCESSION GIB00076CH01 GB:LOCATION 194282..195235 GB:FROM 194282 GB:TO 195235 GB:DIRECTION + GB:PRODUCT cobalamin biosynthesis putative precorrin-8X methylmutase (precorrin isomerase) GB:NOTE Biosynthesis of cofactors, prosthetic groups, and carriers; Heme, porphyrin and cobalamin GB:PROTEIN_ID AAL62729.1 GB:DB_XREF GI:18159294 LENGTH 317 SQ:AASEQ MEIIVVNHGSRRGDFNKLMEEWAAELSRRLGVKAVVGYNEYAEPNWRDLLKRAEGPVIIALAFLGAGNHVVRDILGELGVEMGKWQMSKFGKLVYVTEPLGNSPLVFNALLSRVKRALGNGVESGYISDAEEIEMSSMGYVAAALGLDLNNWKHRIIARAVYASGNLELAKFVYISDDLLGAAREALIAEAPCVVDVKMVAAGMRYPHVYIAVEAPVNNGGTRASAGMSYWLSRLNGACVVIGNAPTALKAALDMWSEGKADIPFAVAAPVGFTNASHVKEELVKSRLPAVVIRGTYGGSGIAVALFNELLRLAYEG GT:EXON 1|1-317:0| BL:SWS:NREP 2 BL:SWS:REP 3->119|CBIX_METKA|5e-07|33.0|115/143| BL:SWS:REP 123->312|COBH_PSEDE|2e-21|36.3|190/210| BL:PDB:NREP 1 BL:PDB:REP 123->312|1f2vA|5e-22|36.3|190/209| RP:PDB:NREP 2 RP:PDB:REP 3->117|2dj5A|2e-15|24.3|115/126| RP:PDB:REP 126->313|3e7dB|7e-13|30.1|186/204| RP:PFM:NREP 2 RP:PFM:REP 8->110|PF01903|2e-06|35.4|99/106|CbiX| RP:PFM:REP 132->313|PF02570|6e-24|40.7|182/197|CbiC| HM:PFM:NREP 2 HM:PFM:REP 132->314|PF02570|9e-48|39.3|183/198|CbiC| HM:PFM:REP 8->110|PF01903|1e-18|36.4|99/105|CbiX| GO:PFM:NREP 5 GO:PFM GO:0009236|"GO:cobalamin biosynthetic process"|PF01903|IPR002762| GO:PFM GO:0016829|"GO:lyase activity"|PF01903|IPR002762| GO:PFM GO:0046872|"GO:metal ion binding"|PF01903|IPR002762| GO:PFM GO:0009236|"GO:cobalamin biosynthetic process"|PF02570|IPR003722| GO:PFM GO:0016993|"GO:precorrin-8X methylmutase activity"|PF02570|IPR003722| RP:SCP:NREP 2 RP:SCP:REP 3->117|1tjnA|1e-15|24.3|115/125|c.92.1.3| RP:SCP:REP 123->312|1f2vA|2e-49|34.7|190/209|c.23.17.1| HM:SCP:REP 3->118|1tjnA_|2.9e-18|34.5|116/0|c.92.1.3|1/1|Chelatase| HM:SCP:REP 122->315|1f2vA_|6.3e-54|40.7|194/209|c.23.17.1|1/1|Precorrin-8X methylmutase CbiC/CobH| OP:NHOMO 289 OP:NHOMOORG 282 OP:PATTERN ---1---111111111--1-1-11--------111111111111111111111--------111--1- ------1-----1-11111-11--1111111111111111-111------------------1-1111111----------11-----11-1-111---------1-------------------11-1-----1-1--11-----11111211111-------2111232-1---111---1---11----1-------------------------1111--------11----------------------------------11---------------------------------------------1----------11-111111111111111111111----111-11111--1111----11------------11111---1111111111111111-21-11111-1--11111111111111---111111111111111111----11---------------------------------1--------1111111----1111-----1111-----------1--111-1---1-----------------11-11---1-1------------1-1-----1-1-------------------------------------------------------1--------------------------------------------------------1----------------------------1--------------------------1-1-----------------------------1-111111111-111---------------------1------------------1---1-----------1------------------------------11-------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 312 STR:RPRED 98.4 SQ:SECSTR ##EEEEEcccccHHHHHHHHHHHHHHHHHTcccEEEEEccccccccHHHHHHTccEEEEEEccccccHHHHTHHHHTTTcccccccEEETTEEEEEccccTTcHHHHHHHHHHHHccTT###cccccccHHHHHHHHHHHHHHHcccTTccGGGHHHHHHHHHHTcGGGGGGEEEcTTHHHHHHHHHHTTccEEEccHHHHHHcccTTcTTHHHHHHHHTccHHHHGGGGGTTTcTTcEEEEcccHHHHHHHHHHHHTTcEEEEcccccccccHHHHHHHHHHccTTccEEEEccccccHHHHHHHHHHHHccHHHT DISOP:02AL 316-318| PSIPRED cEEEEEccccccHHHHHHHHHHHHHHHHHccccEEEEEcccccccHHHHHHHHccEEEEHHHHHHcccHHHHHHHHHHHHHHcccccccccccEEEcccccccHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHccHHHHHHHEEccHHHHHHHHHHHccccEEEcHHHHHHccccccccHHHHHHHHccccHHHHHHHHHHHHHcccEEEEEccHHHHHHHHHHHHcccccccEEEEcccccccHHHHHHHHHHccccEEEEEEccccHHHHHHHHHHHHHHHHcc //