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Pyrobaculum aerophilum str. IM2 (paer1)
Gene : AAL62733.1
DDBJ      :             cobalamin biosynthesis precorrin-3 methylase (cbiF)
Swiss-Prot:             

Homologs  Archaea  46/68 : Bacteria  248/915 : Eukaryota  5/199 : Viruses  0/175   --->[See Alignment]
c.90.1
:208 amino acids
:SECSTR
:PSIPRED
:BLT:PDB   5->189 2qbuA PDBj 6e-22 37.0 %
:RPS:PDB   2->207 2e0nA PDBj 4e-22 25.7 %
:RPS:SCOP  4->189 1pjqA2  c.90.1.1 * 3e-23 23.5 %
:HMM:SCOP  1->189 2dekA1 c.90.1.1 * 2.6e-30 31.5 %
:RPS:PFM   1->175 PF00590 * TP_methylase 2e-12 30.8 %
:HMM:PFM   1->189 PF00590 * TP_methylase 1.9e-32 31.1 180/210  
:BLT:SWISS 5->175 COBI_PSEDE 3e-15 33.1 %
:PROS 5->19|PS00839|SUMT_1

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID AAL62733.1 GT:GENE AAL62733.1 GT:PRODUCT cobalamin biosynthesis precorrin-3 methylase (cbiF) GT:DATABASE GIB00076CH01 GT:ORG paer1 GB:ACCESSION GIB00076CH01 GB:LOCATION 197561..198187 GB:FROM 197561 GB:TO 198187 GB:DIRECTION + GB:PRODUCT cobalamin biosynthesis precorrin-3 methylase (cbiF) GB:NOTE Biosynthesis of cofactors, prosthetic groups, and carriers; Heme, porphyrin and cobalamin GB:PROTEIN_ID AAL62733.1 GB:DB_XREF GI:18159298 LENGTH 208 SQ:AASEQ MLRVVGLGPGDPELLTIKAIRLLSKADVIYVPRSSRSEASLAKNIVLKYARGRVVELPFNMGGVREEQLREIAKIISSGENAVYAVLGDPSLYSTFGKIRKYVDRPVEYVPGVSALISCSLRAGVELAVGDMAVAIVPASRADLLKEALRLFDVVVVAKANRNIELLNELLSSHGGYAVRRCYMEGEAVSNRITWSDYFTTVYLWRAR GT:EXON 1|1-208:0| BL:SWS:NREP 1 BL:SWS:REP 5->175|COBI_PSEDE|3e-15|33.1|169/245| PROS 5->19|PS00839|SUMT_1|PDOC00656| BL:PDB:NREP 1 BL:PDB:REP 5->189|2qbuA|6e-22|37.0|184/228| RP:PDB:NREP 1 RP:PDB:REP 2->207|2e0nA|4e-22|25.7|206/229| RP:PFM:NREP 1 RP:PFM:REP 1->175|PF00590|2e-12|30.8|169/206|TP_methylase| HM:PFM:NREP 1 HM:PFM:REP 1->189|PF00590|1.9e-32|31.1|180/210|TP_methylase| GO:PFM:NREP 2 GO:PFM GO:0008152|"GO:metabolic process"|PF00590|IPR000878| GO:PFM GO:0008168|"GO:methyltransferase activity"|PF00590|IPR000878| RP:SCP:NREP 1 RP:SCP:REP 4->189|1pjqA2|3e-23|23.5|179/233|c.90.1.1| HM:SCP:REP 1->189|2dekA1|2.6e-30|31.5|184/0|c.90.1.1|1/1|Tetrapyrrole methylase| OP:NHOMO 346 OP:NHOMOORG 299 OP:PATTERN ------1111111121-11-2-2-11111-1111122111111--111111211-------132--22 ----1-1-------1------1--11-----11111-111-11-----------------11-11-1111-----------1------11-1--11---------1--------------------1---------11111-----12122121122-------12-2221---1111--1-212-------11-------------1-1----1---2112---1111112----------------------------------11---------------------------------------------1----------211111111111111111111111----212211312--13211---11---------------11---1111111111111111-21-11111-1--122-111111--11-11-------11-11111111----11---------------------------------1----111---------------2------1----------1-2----11-1---1----1---------------11---111-1111-212121211-----1-1-----------------------------1-----1-------------------1----1-1-------1---1--------------------------------111--11-111-111111111111----------1------------------------1-1-1-------------------------------1-2---1-1-111---------------------1------------------1---------------1------------------------------21-------- -------------------------------------------------------------------------------------------------------1------------------------------------------------------------------------------------------1111- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 207 STR:RPRED 99.5 SQ:SECSTR EEEEEEcccccGGGccHHHHHHHHHccEEEEEEEEcTEEcHHHHHHTTTTccGGGEEEEEEEcccGGGHHHHHHHHHTTcEEEEEEcccTTcccTHHHHHHHHHTcEEEEccccHHHHHHHHTTcccccTTccEEEEccccTHHHHHHHTTccEEEEccTTccGGGHHHHHHHHcEEEEEcTTcTTcEEEccTccccccEEEEEcGG# PSIPRED cEEEEEcccccHHHHHHHHHHHHHHccEEEEEcccccccccHHHHHHHHccccEEEEEccccccHHHHHHHHHHHHHccccEEEEEccccccccHHHHHHHHHcccEEEEccccHHHHHHHHHccccccccEEEEEEEcccHHHHHHHHccccEEEEEcccccHHHHHHHHHHcccEEEEEcccccEEEEEEccccccEEEEEEEccc //