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Pyrobaculum aerophilum str. IM2 (paer1)
Gene : AAL62744.1
DDBJ      :             protease
Swiss-Prot:             

Homologs  Archaea  8/68 : Bacteria  179/915 : Eukaryota  32/199 : Viruses  0/175   --->[See Alignment]
d.185.1
:388 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   3->213 1ppjA PDBj 1e-12 23.7 %
:RPS:PDB   3->388 1bccA PDBj 3e-32 16.2 %
:RPS:SCOP  3->205 1hr6A1  d.185.1.1 * 5e-30 20.2 %
:HMM:SCOP  3->217 1bccB1 d.185.1.1 * 3.1e-39 35.4 %
:HMM:SCOP  210->387 2fgeA3 d.185.1.1 * 1.7e-07 22.5 %
:RPS:PFM   13->153 PF00675 * Peptidase_M16 1e-10 31.1 %
:HMM:PFM   20->146 PF00675 * Peptidase_M16 1.3e-20 31.5 127/149  
:HMM:PFM   161->310 PF05193 * Peptidase_M16_C 5.8e-13 23.0 148/183  
:BLT:SWISS 33->212 Y522_RICBR 1e-14 26.7 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID AAL62744.1 GT:GENE AAL62744.1 GT:PRODUCT protease GT:DATABASE GIB00076CH01 GT:ORG paer1 GB:ACCESSION GIB00076CH01 GB:LOCATION complement(208175..209341) GB:FROM 208175 GB:TO 209341 GB:DIRECTION - GB:PRODUCT protease GB:NOTE Protein fate; Degradation of proteins, peptides, and glycopeptides GB:PROTEIN_ID AAL62744.1 GB:DB_XREF GI:18159310 LENGTH 388 SQ:AASEQ MRRVLALDNGVVIVADPFASPLAAVVVAVGVGSLYEDGDKRGITHLLEHVMFRVPGFDVDEAVESLGGSNNAYTQRDAIMITLEGLAASAGGLVELAHRLYVNEKYAEEDVERERAAVLSELRQSRENPSDRVGELAVKALFGDSDWGAPVGGTPETVESIELRDLLEHKRKWFVGGNTLVVLSGGFSEEAMEKAARLFGGLEGGRPQRRTPTWAEGPKRLIEERDVDGVYYAKAVRVAVDNAAAVYPLLSAASIHLEAGTKSVLFNVVRSTGIAYSYYVDFDVVGDVGYLAVVVESARGLEEVRKAVEDALRPRRPPPYRLSFFKYLWESSWRSPVNRAVTLAEFYLKGGRPQEAERVFWSAAVVGTAWLEGRIIDVAEAYLLPEKI GT:EXON 1|1-388:0| BL:SWS:NREP 1 BL:SWS:REP 33->212|Y522_RICBR|1e-14|26.7|180/412| SEG 23->32|aavvvavgvg| SEG 107->118|aeedvereraav| SEG 233->246|akavrvavdnaaav| SEG 276->295|ysyyvdfdvvgdvgylavvv| SEG 313->321|rprrpppyr| BL:PDB:NREP 1 BL:PDB:REP 3->213|1ppjA|1e-12|23.7|211/441| RP:PDB:NREP 1 RP:PDB:REP 3->388|1bccA|3e-32|16.2|382/442| RP:PFM:NREP 1 RP:PFM:REP 13->153|PF00675|1e-10|31.1|135/145|Peptidase_M16| HM:PFM:NREP 2 HM:PFM:REP 20->146|PF00675|1.3e-20|31.5|127/149|Peptidase_M16| HM:PFM:REP 161->310|PF05193|5.8e-13|23.0|148/183|Peptidase_M16_C| GO:PFM:NREP 2 GO:PFM GO:0004222|"GO:metalloendopeptidase activity"|PF00675|IPR011765| GO:PFM GO:0006508|"GO:proteolysis"|PF00675|IPR011765| RP:SCP:NREP 1 RP:SCP:REP 3->205|1hr6A1|5e-30|20.2|203/220|d.185.1.1| HM:SCP:REP 3->217|1bccB1|3.1e-39|35.4|206/0|d.185.1.1|1/1|LuxS/MPP-like metallohydrolase| HM:SCP:REP 210->387|2fgeA3|1.7e-07|22.5|178/0|d.185.1.1|2/2|LuxS/MPP-like metallohydrolase| OP:NHOMO 240 OP:NHOMOORG 219 OP:PATTERN 11----------------11111------------------------------------------1-- 111---------------------------------1---1----1--111--111-1---1---------------------1------1----------------------------------------------------111-11111-1111----------22111---111-1--1---------1111111111-11111111111111-1111111------1--------------------------------------------------------------------------------------------111211111111111122-111111--1------11-1-111--1---112-111---------1-----------------------1--1-1------------------1------1----111111111-----11111111111------11--1------1111---1----------------------------------------1-1--1---------------------------21---1-1121--111-1111-11-------1-------------------------------------------1-------------------1---------------------------------------------------------------------------------------------11111----1--------------------------1111-------------------------------------------------------------------------------------------------------1---1-111--- ----1-1------1------------------------------------------------------------------------------------------------2-----2-1--11-----------13111-1-132111--22---121-113---1-2--1------1--------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 386 STR:RPRED 99.5 SQ:SECSTR ##EEEEcccccEEEEEEcccccEEEEEEEccccTTccTTTTTHHHHHHHHHccccHHHHHHHHHTTTcEEEEEEccccEEEEEEEccccHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHTcHHHHHHHHHHHHHTTTcGGGccccccHHHHHHccHHHHHHHHHHHccGGGEEEEEEEcccHHHHHHHHHHcccccccHHHHcccccccccEEEEEcTTcccEEEEEEEEEccTTcGGGTHHHHHHHHcccTTccccHHHHHHHTTcccEEEEEEEEccccEEEEEEEEEcTTHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHcccHHHHHHHHHHHcTTccc DISOP:02AL 330-339, 387-388| PSIPRED cEEEEEEcccEEEEEEcccccEEEEEEEEEccccccccccccHHHHHHHHHHcccHHHHHHHHHHHccEEEEEEccEEEEEEEEEcHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHcccccccccccccHHHHHcccHHHHHHHHHHHcccccEEEEEEccccHHHHHHHHHHHHcccccccccccccccccccEEEEEcccccEEEEEEEEccccccHHHHHHHHHHHHHccccccHHHHHHHHHcccEEEEEccccccccccEEEEEEEccHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccc //