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Pyrobaculum aerophilum str. IM2 (paer1)
Gene : AAL62874.1
DDBJ      :             metallo cofactor biosynthesis protein
Swiss-Prot:             

Homologs  Archaea  67/68 : Bacteria  540/915 : Eukaryota  42/199 : Viruses  0/175   --->[See Alignment]
c.1.28
:384 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   35->182 2fb2B PDBj 2e-10 33.3 %
:RPS:PDB   26->339 3cixA PDBj 4e-26 8.7 %
:RPS:SCOP  35->320 1tv7A  c.1.28.3 * 3e-37 26.1 %
:HMM:SCOP  34->352 1tv8A_ c.1.28.3 * 1.9e-72 32.5 %
:RPS:PFM   42->144 PF04055 * Radical_SAM 2e-13 40.8 %
:HMM:PFM   41->193 PF04055 * Radical_SAM 5.6e-29 30.9 152/166  
:HMM:PFM   180->254 PF01261 * AP_endonuc_2 9.2e-05 12.9 70/211  
:BLT:SWISS 42->370 PQQE_RHIME 8e-28 29.0 %

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID AAL62874.1 GT:GENE AAL62874.1 GT:PRODUCT metallo cofactor biosynthesis protein GT:DATABASE GIB00076CH01 GT:ORG paer1 GB:ACCESSION GIB00076CH01 GB:LOCATION 310028..311182 GB:FROM 310028 GB:TO 311182 GB:DIRECTION + GB:PRODUCT metallo cofactor biosynthesis protein GB:NOTE Biosynthesis of cofactors, prosthetic groups, and carriers; Other GB:PROTEIN_ID AAL62874.1 GB:DB_XREF GI:18159450 LENGTH 384 SQ:AASEQ MIPISVMVTGVGTTSFRVKGRFGVDKPSDFSAPFRPIVSWNITRRCNLKCVHCYIDAGLAEPGELNTKEALDVVDQMAEVGVPLILFTGGEPLTRPDFFEIAEYAKDRGIKLVLSTNGTLITPEVARRLREVGVVYVGVSLDSISADFHDKFRGVTGSFAAALAGIKNALNAGLDVGLRFVVTAKNIHEVGQYIDFAASLGVRRITFYHLSAAGRAQRLSEDWWYTPQQYKQFIETLISKAREYAGRIEIETTLAPFDGIYIALTVGGGDVKYLEFVESTGGCGRKIISIYPNGDVYPCQFIDFYRLGNVREKRLKEILKPERLAPFVETDKFLRGTKCSACQFKKFCKGGDRARAYYLTGDMFGDDPLCPIPSIFNNATQSGN GT:EXON 1|1-384:0| BL:SWS:NREP 1 BL:SWS:REP 42->370|PQQE_RHIME|8e-28|29.0|314/375| BL:PDB:NREP 1 BL:PDB:REP 35->182|2fb2B|2e-10|33.3|147/326| RP:PDB:NREP 1 RP:PDB:REP 26->339|3cixA|4e-26|8.7|298/345| RP:PFM:NREP 1 RP:PFM:REP 42->144|PF04055|2e-13|40.8|103/164|Radical_SAM| HM:PFM:NREP 2 HM:PFM:REP 41->193|PF04055|5.6e-29|30.9|152/166|Radical_SAM| HM:PFM:REP 180->254|PF01261|9.2e-05|12.9|70/211|AP_endonuc_2| GO:PFM:NREP 2 GO:PFM GO:0003824|"GO:catalytic activity"|PF04055|IPR007197| GO:PFM GO:0051536|"GO:iron-sulfur cluster binding"|PF04055|IPR007197| RP:SCP:NREP 1 RP:SCP:REP 35->320|1tv7A|3e-37|26.1|272/327|c.1.28.3| HM:SCP:REP 34->352|1tv8A_|1.9e-72|32.5|308/0|c.1.28.3|1/1|Radical SAM enzymes| OP:NHOMO 1440 OP:NHOMOORG 649 OP:PATTERN 33152453666666743633344533342433213332111115655496CD842544324243711- 57612-12111---11144-41--1234333111113112-322---12------1----12212-211-1--------3551-22121121-1-1------111131-1---------------23-334-133411122---211-13222-----1-1---121-121------------1111151--11223211-31323122112213332-331--21111-111----------------1---1----------11----------2-1------2-11-------------------------11111111-662642322422-3-4166-1--1-8223-335555463365543353--241---1-----21221-113541111111111111-22232422-1--1---222211221211-3-211113-422222222122224-2-----------------------------1---------1211111-111111-11111-2-133221--12321-11-1--1---211111-----------224-744436435943326867949541121326D11121111111-111---111112111----212----11111-1-1111111-212----1-1------321-1223222322222-2332223222222223221121121-1132222221212222112112222-----------------1---------3132-----11-11111111111-111---21333222312222232221----1----111111111121111111211111----1112------------------------------------------2362433333222 ----1-------111----------------------------------------------------------1------------------------------------2-3-111----1--12---8D4-321--1--111--1------1-21111--112----1-23----1-----1----1---1-1-2-- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 322 STR:RPRED 83.9 SQ:SECSTR #################ccEEEEEEHHHHHccEEEEEEEEEEEcccccccTTcTTcccccccccccHHHHHHHHHHHHHTTccEEEEEEcccGGGTTHHHHHHHHHHHTTccEEEEEcccccHHHHHHHHHTTccEEEccccccccHHHHHHHcTTccHHHHHHHHHHHHTTcEEEEccEEccTTcHHHHHHHHHHHHHHTccEEccEEccccTTccTTTTcccccHHHHHHHHHHHHHHcTTccccccHHHHHHcTTHHHHHHTTTccEEccEEEEcTTcccccTEccTTTTGGGcccccTccTTTTccTTcHHHHHHHHHHHTTcEEcccccccccc############################################# DISOP:02AL 380-384| PSIPRED ccccEEEEEEEEEccEEEccccccccHHHcccccccEEEEEEccccccccccccccccccccccccHHHHHHHHHHHHHccccEEEEEcccccHHHHHHHHHHHHHHcccEEEEEEccccccHHHHHHHHHcccEEEEEEcccccHHHHHHHHcccccHHHHHHHHHHHHHcccEEEEEEEEccccHHHHHHHHHHHHHccccEEEEEEEEEcccccccHHHccccHHHHHHHHHHHHHHHHHHcccEEEEcccccccccEEEEccccccccccccccccccccccEEEEEEccEEEEccccccccccccccccHHHHHccHHHHHHHHcccccccccccccccccccccccHHHHHHHcccccccccccccccHHcccccccc //