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Pyrobaculum aerophilum str. IM2 (paer1)
Gene : AAL62950.1
DDBJ      :             cytidyltransferase
Swiss-Prot:             

Homologs  Archaea  66/68 : Bacteria  161/915 : Eukaryota  2/199 : Viruses  1/175   --->[See Alignment]
a.8.11c.26.1
:228 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   28->68 2pmrA PDBj 9e-06 41.5 %
:BLT:PDB   86->200 3glvA PDBj 4e-16 31.3 %
:RPS:PDB   85->218 1cozA PDBj 1e-14 25.2 %
:RPS:SCOP  22->68 2pmrA1  a.8.11.1 * 1e-14 36.2 %
:RPS:SCOP  85->218 1cozA  c.26.1.2 * 6e-15 25.2 %
:HMM:SCOP  84->218 1cozA_ c.26.1.2 * 2.7e-19 31.5 %
:RPS:PFM   7->70 PF04010 * DUF357 1e-09 40.6 %
:RPS:PFM   88->172 PF01467 * CTP_transf_2 2e-04 32.1 %
:HMM:PFM   7->71 PF04010 * DUF357 3.1e-23 44.6 65/75  
:HMM:PFM   89->216 PF01467 * CTP_transf_2 1.4e-14 29.3 123/157  
:BLT:SWISS 2->72 Y273_METJA 4e-04 34.8 %
:BLT:SWISS 85->222 Y1179_METJA 1e-23 39.1 %

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID AAL62950.1 GT:GENE AAL62950.1 GT:PRODUCT cytidyltransferase GT:DATABASE GIB00076CH01 GT:ORG paer1 GB:ACCESSION GIB00076CH01 GB:LOCATION 375280..375966 GB:FROM 375280 GB:TO 375966 GB:DIRECTION + GB:PRODUCT cytidyltransferase GB:NOTE Unclassified GB:PROTEIN_ID AAL62950.1 GB:DB_XREF GI:18159532 LENGTH 228 SQ:AASEQ MDRVALYIKNLEEALDSLVLRDGSYKHIVDLAKAYLKDSKYYYSTGDRETALATVSYAEGLLDALKLMGVADFKWKKPSEIKNVKRVMVAGTFEIIHPGHLEYLKKAWNMGYVIAVVSSDENAERAKKRKIIIPQQQRAEVLASLYYVHDVVLGRPGNIFDIFHSVKPDIVLLGPNQGVSESVVREEAKKRGVEVEVIRLENLKNCELCSTTKIIEKILSTFNAANKY GT:EXON 1|1-228:0| BL:SWS:NREP 2 BL:SWS:REP 2->72|Y273_METJA|4e-04|34.8|69/103| BL:SWS:REP 85->222|Y1179_METJA|1e-23|39.1|138/149| BL:PDB:NREP 2 BL:PDB:REP 28->68|2pmrA|9e-06|41.5|41/76| BL:PDB:REP 86->200|3glvA|4e-16|31.3|115/122| RP:PDB:NREP 1 RP:PDB:REP 85->218|1cozA|1e-14|25.2|123/126| RP:PFM:NREP 2 RP:PFM:REP 7->70|PF04010|1e-09|40.6|64/75|DUF357| RP:PFM:REP 88->172|PF01467|2e-04|32.1|78/145|CTP_transf_2| HM:PFM:NREP 2 HM:PFM:REP 7->71|PF04010|3.1e-23|44.6|65/75|DUF357| HM:PFM:REP 89->216|PF01467|1.4e-14|29.3|123/157|CTP_transf_2| GO:PFM:NREP 2 GO:PFM GO:0009058|"GO:biosynthetic process"|PF01467|IPR004820| GO:PFM GO:0016779|"GO:nucleotidyltransferase activity"|PF01467|IPR004820| RP:SCP:NREP 2 RP:SCP:REP 22->68|2pmrA1|1e-14|36.2|47/75|a.8.11.1| RP:SCP:REP 85->218|1cozA|6e-15|25.2|123/126|c.26.1.2| HM:SCP:REP 84->218|1cozA_|2.7e-19|31.5|124/126|c.26.1.2|1/1|Nucleotidylyl transferase| OP:NHOMO 232 OP:NHOMOORG 230 OP:PATTERN 111111111111111111111111-1111111111211111111111111111111111111111-11 -----------------------------------------------------------------------------------11111------------------11----------------------1---11------------11---------------1----1-----------------11----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1--------------------------------------------------------------------------------------------------------11------------------------------------------------------------------------------------------1-1---1---1----1-1-11111-------1-----11-111111111111---1---1-1-----------------------------1----------111--1-1111111111-1111111111111111111111111--1111111111111111-11111111--111111111111---11111-----1---1111-1111111111------------------1--1111-111---------------1111---11-----------------1----11------------------------------------------------- -----------------------1-1----------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ----1-------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 206 STR:RPRED 90.4 SQ:SECSTR #################EEcTTccEEEEEEEEEEEEETTEEEEEEEEEHHccccccTTccEEcTTTEccHHHHHHHHHHHHHTTcEEEEEEccccccHHHHHHHHHHHTTcEEEEEEEcHHHHHHHHTccccccHHHHHHHHTTcTTccEEEEEcccTTHHHHHHTTccEEEEEGGGTTTTGGGTTTcEEEEEcccTTccEEEEEGGGccHHHHHHTcHHHTT##### DISOP:02AL 71-81, 224-228| PSIPRED cHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHccccEEEEEccccccHHHHHHHHHHHHHHHHHHHHccccccccccccccEEEEEEcccccHHHHHHHHHHHHHHHccEEEEEEccHHHHHcccccccccHHHHHHHHHHcccccEEEccccccHHHHHHHHcccEEEEcccccccccHHHHHHHHcccEEEEEEEEEccccccccHHHHHHHHHHcccccccc //