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Pyrobaculum aerophilum str. IM2 (paer1)
Gene : AAL62978.1
DDBJ      :             electron transfer flavoprotein alpha subunit (etfA)
Swiss-Prot:             

Homologs  Archaea  30/68 : Bacteria  542/915 : Eukaryota  172/199 : Viruses  0/175   --->[See Alignment]
c.26.2c.31.1
:346 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   14->341 2a1uA PDBj 3e-33 31.2 %
:RPS:PDB   17->339 3clsD PDBj 6e-43 24.1 %
:RPS:SCOP  15->237 1efpB  c.26.2.3 * 7e-26 17.0 %
:RPS:SCOP  216->339 1efpA2  c.31.1.2 * 4e-47 53.2 %
:HMM:SCOP  15->211 1o97D1 c.26.2.3 * 4.3e-51 41.1 %
:HMM:SCOP  218->339 1o97D2 c.31.1.2 * 6.7e-47 59.0 %
:RPS:PFM   20->175 PF01012 * ETF 4e-19 38.0 %
:RPS:PFM   224->303 PF00766 * ETF_alpha 1e-28 70.0 %
:HMM:PFM   16->178 PF01012 * ETF 8e-46 40.9 159/164  
:HMM:PFM   220->303 PF00766 * ETF_alpha 5.3e-38 65.5 84/86  
:HMM:PFM   290->335 PF09290 * AcetDehyd-dimer 0.00042 28.3 46/137  
:BLT:SWISS 13->343 ETFA_CLOTS 9e-82 47.5 %
:PROS 283->309|PS00696|ETF_ALPHA
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID AAL62978.1 GT:GENE AAL62978.1 GT:PRODUCT electron transfer flavoprotein alpha subunit (etfA) GT:DATABASE GIB00076CH01 GT:ORG paer1 GB:ACCESSION GIB00076CH01 GB:LOCATION complement(400138..401178) GB:FROM 400138 GB:TO 401178 GB:DIRECTION - GB:PRODUCT electron transfer flavoprotein alpha subunit (etfA) GB:NOTE Energy metabolism; Electron transport GB:PROTEIN_ID AAL62978.1 GB:DB_XREF GI:18159562 LENGTH 346 SQ:AASEQ MPCSLWTPVNKEEYKGVWVYLERAGDRLKDVGLELLGKARELAQKLGGAEVGGVIVAGSEEMAREAIYHGADKVVIIDNPELKSYTPVEYAEAIAKVVQKYKPEIFLIGGTKRGRELAAYIANTLTTGITADCTALEIDPKTRDLLQIRPTFGGTQLATIRTPQRRPQMASVRPGVFPKPQRDPSRTGEIITEKIEIPKRRTRLISVEKRLEKDVADLPPVESADIVVAGGRGLGSAEGFKLLIELAKLLNGTVGASLMAVRAGWAPHTRQIGQTGKTIRPKLYIAVGISGAIQHLMGIMEAKTIIAINPDPHAPIMENADYAVVGDYKQIIPLLIEEIRKIRNQR GT:EXON 1|1-346:0| BL:SWS:NREP 1 BL:SWS:REP 13->343|ETFA_CLOTS|9e-82|47.5|326/330| PROS 283->309|PS00696|ETF_ALPHA|PDOC00583| SEG 47->61|ggaevggvivagsee| BL:PDB:NREP 1 BL:PDB:REP 14->341|2a1uA|3e-33|31.2|311/315| RP:PDB:NREP 1 RP:PDB:REP 17->339|3clsD|6e-43|24.1|315/318| RP:PFM:NREP 2 RP:PFM:REP 20->175|PF01012|4e-19|38.0|150/157|ETF| RP:PFM:REP 224->303|PF00766|1e-28|70.0|80/86|ETF_alpha| HM:PFM:NREP 3 HM:PFM:REP 16->178|PF01012|8e-46|40.9|159/164|ETF| HM:PFM:REP 220->303|PF00766|5.3e-38|65.5|84/86|ETF_alpha| HM:PFM:REP 290->335|PF09290|0.00042|28.3|46/137|AcetDehyd-dimer| RP:SCP:NREP 2 RP:SCP:REP 15->237|1efpB|7e-26|17.0|212/246|c.26.2.3| RP:SCP:REP 216->339|1efpA2|4e-47|53.2|124/124|c.31.1.2| HM:SCP:REP 15->211|1o97D1|4.3e-51|41.1|192/0|c.26.2.3|1/1|Adenine nucleotide alpha hydrolases-like| HM:SCP:REP 218->339|1o97D2|6.7e-47|59.0|122/0|c.31.1.2|1/1|DHS-like NAD/FAD-binding domain| OP:NHOMO 1211 OP:NHOMOORG 744 OP:PATTERN 22----2222222222-22322212112-111-----------------------------3322--- 1232211111111111111-11111111111111111122111111-11---111112--11211111121--------152------11111122---111111111-1---------------1111111112111122---12-------11-----------1----------------11111--112111111-1111111111111111111131111------21----------------------1-------------------------------------------------------------------1532555555554541433422215-3-1-12-973463-141--11-3-12-11111111132222111222221111111111112222242212113112334335233411111111111112222222222212322-----------------------------1121113321222233322222223722221245612121112261222231213111-112111111111---14115422----------7471915--11211114-------------------------1111-1112121-1111111311112132121-----1-------1-1-1--3222333332-2333333333233333331-------13231333332313113-2213222-----------------1111111111-1124---------------11111111114122222222222221223-------------1-----11-1111111111111111--12111111----------1-------------------------11111121111-- ----111-211-11111111111111111111111111111111111-111111111-1111111111--1111111111111111-1-12111111111111112-12121211-11-1111111-2-231-122111-1-11111-1111-2122111211211121131111111-----1111321111121111 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 328 STR:RPRED 94.8 SQ:SECSTR #############ccEEEEEccEETTEEcTHHHHHHHHHHHHcccTTcEEEEEEEcTTGGGGHHHHccTTccEEEEEEccccccccHHHHHHHHHHHHHHHcccEEEEEccHHHHTTHHHHHHHcccEEEEEEcEEEEETETTEEEEEEEETTTTEEEEEccTTcccEEEEEcTTcccccccccccEEEEEEcccccccccccccccccccccccTccTcTTcccEEEEEcGGGccGGGHHHHHHHHHHHTcEEEEcHHHHHTTcccGGGcccccccccTccEEEEEcccccHHHHHHHTTccEEEEEcccTTcGGGGTccEEEcccHHHHHHHHHHHcTc##### DISOP:02AL 180-192, 344-346| PSIPRED ccccccccccHHHHccEEEEEEccccEEcHHHHHHHHHHHHHHHHcccEEEEEEEEccHHHHHHHHHHccccEEEEEccHHHccccHHHHHHHHHHHHHHccccEEEEEcccccHHHHHHHHHHHcccEEEEEEEEEEEcccEEEEEEEEEccccEEEEEEEccccEEEEEEEcccccccccccccccEEEEEEccccccccEEEEEEEEEccccccccccccccEEEEEccccccHHHHHHHHHHHHHHccEEEccHHHHHcccccHHHEEccccEEEccEEEEEEEEccHHHHHHHHccccEEEEEEccccccHHHHccEEEEHHHHHHHHHHHHHHHHHHccc //