[GTOP] [HELP] [ORGANISMS] [SEARCH] [SUMMARY]
Pyrobaculum aerophilum str. IM2 (paer1)
Gene : AAL63037.1
DDBJ      :             conserved protein (possible oxidoreductase)
Swiss-Prot:IDI2_PYRAE   RecName: Full=Isopentenyl-diphosphate delta-isomerase;         Short=IPP isomerase;         EC=5.3.3.2;AltName: Full=Isopentenyl pyrophosphate isomerase;

Homologs  Archaea  60/68 : Bacteria  228/915 : Eukaryota  3/199 : Viruses  0/175   --->[See Alignment]
c.1.4
:352 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   3->348 2zrwA PDBj 7e-58 40.5 %
:RPS:PDB   10->330 3dh7A PDBj 6e-86 40.5 %
:RPS:SCOP  26->348 1p0kA  c.1.4.1 * 5e-78 39.2 %
:HMM:SCOP  22->350 1p0kA_ c.1.4.1 * 3.6e-75 36.5 %
:RPS:PFM   40->334 PF01070 * FMN_dh 5e-09 33.7 %
:HMM:PFM   25->165 PF01070 * FMN_dh 3.6e-14 23.4 124/355  
:HMM:PFM   177->330 PF01070 * FMN_dh 1.2e-16 31.0 129/355  
:BLT:SWISS 1->352 IDI2_PYRAE 0.0 100.0 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID AAL63037.1 GT:GENE AAL63037.1 GT:PRODUCT conserved protein (possible oxidoreductase) GT:DATABASE GIB00076CH01 GT:ORG paer1 GB:ACCESSION GIB00076CH01 GB:LOCATION complement(446088..447146) GB:FROM 446088 GB:TO 447146 GB:DIRECTION - GB:PRODUCT conserved protein (possible oxidoreductase) GB:NOTE Unclassified GB:PROTEIN_ID AAL63037.1 GB:DB_XREF GI:18159625 LENGTH 352 SQ:AASEQ MGIDKRKDDHIYLASSELSQIGSAWFEEVVLIHNALPEIDLSEVDLTTRFLGAPVKAPFGIGAMTGGTELAGKINAELAKAAEEFGIPIYVGSQRIALVKPEVKWTFEVVKQNAPHVPKVANLGAPQLAELGERELEEWVVQAIDMIDAYAIAIHLNAAQEVVQPEGEPRFKGVLEKLKIVKRAAGKPLIVKETGNGISKEVAARLSGIADAIDVGGFGGTSFVAIEGARAKESPLQKRLAETYKWWGIPTAASICEVKSAYAGYLIASGGIRSGLDGAKAIALGANFFTMSQPLLKAALDGRLREEIAMIIAELKTAMFLTGARTVQELALVPRVYGPRLRNWIEQRRLTC GT:EXON 1|1-352:0| SW:ID IDI2_PYRAE SW:DE RecName: Full=Isopentenyl-diphosphate delta-isomerase; Short=IPP isomerase; EC=5.3.3.2;AltName: Full=Isopentenyl pyrophosphate isomerase; SW:GN Name=fni; OrderedLocusNames=PAE0801; SW:KW Complete proteome; Cytoplasm; Flavoprotein; FMN; Isomerase;Isoprene biosynthesis; NADP. SW:EXACT T SW:FUNC + BL:SWS:NREP 1 BL:SWS:REP 1->352|IDI2_PYRAE|0.0|100.0|352/352| GO:SWS:NREP 3 GO:SWS GO:0005737|"GO:cytoplasm"|Cytoplasm| GO:SWS GO:0016853|"GO:isomerase activity"|Isomerase| GO:SWS GO:0008299|"GO:isoprenoid biosynthetic process"|Isoprene biosynthesis| SEG 143->154|aidmidayaiai| BL:PDB:NREP 1 BL:PDB:REP 3->348|2zrwA|7e-58|40.5|341/364| RP:PDB:NREP 1 RP:PDB:REP 10->330|3dh7A|6e-86|40.5|304/318| RP:PFM:NREP 1 RP:PFM:REP 40->334|PF01070|5e-09|33.7|258/328|FMN_dh| HM:PFM:NREP 2 HM:PFM:REP 25->165|PF01070|3.6e-14|23.4|124/355|FMN_dh| HM:PFM:REP 177->330|PF01070|1.2e-16|31.0|129/355|FMN_dh| GO:PFM:NREP 1 GO:PFM GO:0016491|"GO:oxidoreductase activity"|PF01070|IPR000262| RP:SCP:NREP 1 RP:SCP:REP 26->348|1p0kA|5e-78|39.2|286/306|c.1.4.1| HM:SCP:REP 22->350|1p0kA_|3.6e-75|36.5|315/329|c.1.4.1|1/1|FMN-linked oxidoreductases| OP:NHOMO 299 OP:NHOMOORG 291 OP:PATTERN 111111111111111112111111-42----1111111111111111111111111111111111--- ------------1-111----1--12-----111111---------------------------------------------1------------------------------------------1111111111111111---1-11111111111------111-1111------------11111---111111111111111111--11111111---1--11111111-11111111111111111111111111111111111111111111111111111111111111111111111111111111111111111--------------------------111--1----1-1-1-1------1----------------------------------------------1-1----11-------1-----------------------------------------1111111111111---------------------------------------------------------------------------------1-------------------------1-11-------------------------------------------------------------1-----------1------------------------------------------------------------------------------------------1111---------------------------------------------1------------1---------11---------------------------11111111--1-------------------------------------- --------211-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 351 STR:RPRED 99.7 SQ:SECSTR #TccHHHHHcHHHHHHcccccccccGGGEEEcccTTccccGGGccccEEETTEEEcccEEEcccccGGGTcccHHHHHHHHHHHHTcEEEEEEcTTGGGcccccccccccTTTcccccEEEEccGGGGGTccHHHHEEEcHHHHHHHTccEEEEEccHHHHHHTTTcccccTTHHHHHHHTcHcccccEEEEcccccccHHHHHHHTccccEEEccccTcccHHHHHHHHHHcHHHHccccHHHHTccccHHHHHHHHHTTccccEEEEcccccHHHHHHHHHTTccEEEEcGGGHHHHHccHHHHHHHHHHHHHHHHHHHHTccccGGGTTccEEEcccccccHHHHHHHH DISOP:02AL 1-3| PSIPRED ccHHHHHHHHHHHHHccccccccccHHHEEEcccccccccccccccEEEEccEEEcccEEEccccccccccHHHHHHHHHHHHHcccEEEEccHHHHHccHHHHHHHHHHHHHcccEEEEEEcccHHHHHcccccHHHHHHHHHHHHcccEEEEEccccHHHcccccccHHHHHHHHHHHHHHHcccEEEEEEccccccHHHHHHHHHcccEEEEcccccccHHHHHHHHccccHHHHHHHHHHHcccccHHHHHHHHHHHcccEEEEEcccccHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHccEEEccHHHHHHHHccccc //