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Pyrobaculum aerophilum str. IM2 (paer1)
Gene : AAL63108.1
DDBJ      :             DNA replication licensing factor (mcm)
Swiss-Prot:             

Homologs  Archaea  68/68 : Bacteria  0/915 : Eukaryota  197/199 : Viruses  0/175   --->[See Alignment]
b.40.4c.37.1d.17.6
:680 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   11->593 3f9vA PDBj e-137 46.2 %
:RPS:PDB   133->171 3a44C PDBj 3e-05 29.7 %
:RPS:PDB   265->473 2eb0A PDBj 7e-25 9.5 %
:RPS:SCOP  12->252 1ltlA  b.40.4.11 * 9e-45 30.7 %
:RPS:SCOP  281->410 1d2nA  c.37.1.20 * 9e-11 12.9 %
:RPS:SCOP  440->571 1iq8A4  d.17.6.1 * 3e-29 12.9 %
:HMM:SCOP  8->249 1ltlA_ b.40.4.11 * 9.1e-63 36.8 %
:HMM:SCOP  283->587 1g8pA_ c.37.1.20 * 2.6e-44 31.1 %
:RPS:PFM   117->165 PF02146 * SIR2 7e-04 45.8 %
:RPS:PFM   136->165 PF09723 * CxxC_CxxC_SSSS 4e-05 50.0 %
:RPS:PFM   267->570 PF00493 * MCM 8e-85 58.7 %
:HMM:PFM   266->588 PF00493 * MCM 8.2e-140 59.6 322/326  
:HMM:PFM   136->167 PF09723 * CxxC_CxxC_SSSS 3.4e-09 43.3 30/42  
:BLT:SWISS 11->679 MCM_SULSO e-148 44.0 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID AAL63108.1 GT:GENE AAL63108.1 GT:PRODUCT DNA replication licensing factor (mcm) GT:DATABASE GIB00076CH01 GT:ORG paer1 GB:ACCESSION GIB00076CH01 GB:LOCATION 518871..520913 GB:FROM 518871 GB:TO 520913 GB:DIRECTION + GB:PRODUCT DNA replication licensing factor (mcm) GB:NOTE DNA metabolism; DNA replication, recombination, and repair GB:PROTEIN_ID AAL63108.1 GB:DB_XREF GI:18159702 LENGTH 680 SQ:AASEQ MSLEIELDLLRDKFRELVTSNEKISDEVINIIIQRKRSLEVDFHDILMFDKSLADLVVERPKLVLPEADKVVREIVEEKDPETAKALKRFYFRVRGSPLSVSLRKLRSEYIGRLIKIEGIVTRQTPPKHFLYKALYRCTQCGYEIELLQELERHVEPPAKCPRCGASKSFTLVTELSQYIDWQKVIVQERPEDLPPGQLPRSVEVVLLDDLVDTVKPGDIISLTGVVDLTLSELKKGRPPIVTSYIQGVHVDTMNKELVEEITKEDEQKILEISRRPDVRELIIRSIAPSIYGYEEVKEAVACLLFGGNEIVYPDGVRVRGDINILLIGDPGTAKSQLLKFVAKIAPRAVYTTGKGSSAAGLTAAVVRDKLTGEFYLEAGALVLADKGVAVIDEIDKMDAKDRVALHEAMEQNTVSISKAGIVATLNARAAVLAAANPAFGRYLPNRTVAENIDLPVSLLSRFDLIFVIRDEPREEFDSAVAGHILDLHSGKTPEAFRDVLRPDFLRKYIMYARRYVRPILSEEAKERIKAFYLEMRKRYQGPGTAIAITARQLEALIRLTTAEAKMRLSPIAAAEDAERAIRLYLAFLKSVGIDIESGAIDIDAIITGVPASRREAYIKVVELLKKLEEAERGPVKIDRLKAEAEKLGIPPAEVQRIVELLIRNGEAYTPRPGYIKRVG GT:EXON 1|1-680:0| BL:SWS:NREP 1 BL:SWS:REP 11->679|MCM_SULSO|e-148|44.0|663/686| SEG 205->213|vvllddlvd| SEG 423->439|vatlnaraavlaaanpa| SEG 572->583|iaaaedaerair| SEG 620->630|kvvellkklee| BL:PDB:NREP 1 BL:PDB:REP 11->593|3f9vA|e-137|46.2|578/595| RP:PDB:NREP 2 RP:PDB:REP 133->171|3a44C|3e-05|29.7|37/122| RP:PDB:REP 265->473|2eb0A|7e-25|9.5|200/304| RP:PFM:NREP 3 RP:PFM:REP 117->165|PF02146|7e-04|45.8|48/178|SIR2| RP:PFM:REP 136->165|PF09723|4e-05|50.0|28/41|CxxC_CxxC_SSSS| RP:PFM:REP 267->570|PF00493|8e-85|58.7|303/323|MCM| HM:PFM:NREP 2 HM:PFM:REP 266->588|PF00493|8.2e-140|59.6|322/326|MCM| HM:PFM:REP 136->167|PF09723|3.4e-09|43.3|30/42|CxxC_CxxC_SSSS| GO:PFM:NREP 9 GO:PFM GO:0006342|"GO:chromatin silencing"|PF02146|IPR003000| GO:PFM GO:0006476|"GO:protein amino acid deacetylation"|PF02146|IPR003000| GO:PFM GO:0008270|"GO:zinc ion binding"|PF02146|IPR003000| GO:PFM GO:0016811|"GO:hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides"|PF02146|IPR003000| GO:PFM GO:0045449|"GO:regulation of transcription"|PF02146|IPR003000| GO:PFM GO:0070403|"GO:NAD binding"|PF02146|IPR003000| GO:PFM GO:0003677|"GO:DNA binding"|PF00493|IPR001208| GO:PFM GO:0005524|"GO:ATP binding"|PF00493|IPR001208| GO:PFM GO:0006260|"GO:DNA replication"|PF00493|IPR001208| RP:SCP:NREP 3 RP:SCP:REP 12->252|1ltlA|9e-45|30.7|228/239|b.40.4.11| RP:SCP:REP 281->410|1d2nA|9e-11|12.9|124/246|c.37.1.20| RP:SCP:REP 440->571|1iq8A4|3e-29|12.9|132/145|d.17.6.1| HM:SCP:REP 8->249|1ltlA_|9.1e-63|36.8|234/239|b.40.4.11|1/1|Nucleic acid-binding proteins| HM:SCP:REP 283->587|1g8pA_|2.6e-44|31.1|270/333|c.37.1.20|1/1|P-loop containing nucleoside triphosphate hydrolases| OP:NHOMO 1778 OP:NHOMOORG 265 OP:PATTERN 11111111111111111111111131121122111443444831111111211211113111111111 --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- 88668A8-O8868887666666666666666666666555556666666666656665676666666636667668627766567666-6766666666666666788C9H9A9BF977977879A8G7S*B1EAI7787867C447866887B8988B9EH88889789L67B98889*88A7888BE689889898C ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 583 STR:RPRED 85.7 SQ:SECSTR ##########HHHHHHHHHHccTTHHHHHHHHHcccccccccccccccccccHHHHHHHHHHHHHHHHHTHHHHHHTTTcHHHHHHHHHHHccEEccccEEcGGGccHHHHHHHHHHHHHHHHTTcccEEEEccEEEccccccEEETTHHHHHccccccccTTTccccccccccTTcEEEEEEEEEEEccTTTccTTccccEEEEEEEGGGTTccccccEEEEEEEccccccTcEEETGGccTTGGGcEEEEEEEcccccccccEEEEcccccHHHHHHHHHHTTcGGGGTcccccccHHHHHHHHHHHHTTTTcTTccHHHHHHHHHHHHHHTcccHHHHcccHHHHHHHHHHHHHGGGGccHHHHHTTcEEEEEETTEEEEEEEEEEccTHHHHHHHHHHHHHHHHHHHHTTccEEEEEEEETTTTEEEEEEEEcHHHHHHHccccTTcEEEETTcccHHHHTHHHHHHHHHHHHHHHHHHTccHHHTTHHHHHHHTTccHHHHHHHHHHHHHHTTTTccHHHHHHHHHHHHHHHHHHccTTcccTHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHTTc####################################################################################### DISOP:02AL 193-196, 602-620, 631-632| PSIPRED cccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccEEEEEHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHccEEEEEEccccEEcccccccHHHcccEEEEEEEEEEEcccEEEEEEEEEEEccccEEEEEEEEcccEEEccEEcccccccccEEEEcccEEEEEEEEEEEEccHHHccccccccEEEEEEEEccccccccccEEEEEEEEEEcccccccccccEEEEEEEEEEEEEcccHHcccccHHHHHHHHHHccccHHHHHHHHHHHHHccHHHHHHHHHHHHHcccccEEccccccccccccEEEEccccHHHHHHHHHHHHHcccEEEEcccccccccccEEEEEccccccEEEEcccEEEccccEEEEEccccccHHHHHHHHHHHHHccEEEEcccEEEEccccEEEEEEcccccccccccccHHHHccccHHHHHHccEEEEEcccccHHHHHHHHHHHHHHHHcccHHHHHccccHHHHHHHHHHHHHHcccEEcHHHHHHHHHHHHHHHHHHHccccEEEEcHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHcccccccccHHHHHcccccHHHHHHHHHHHHHHHHHHcccccEEHHHHHHHHHHccccHHHHHHHHHHHHHcccEEEEccccEEEcc //