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Pyrobaculum aerophilum str. IM2 (paer1)
Gene : AAL63150.1
DDBJ      :             hydrogenase expression/formation protein HypE
Swiss-Prot:             

Homologs  Archaea  61/68 : Bacteria  232/915 : Eukaryota  0/199 : Viruses  0/175   --->[See Alignment]
d.139.1d.79.4
:326 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   31->299 2z1fA PDBj 3e-19 28.5 %
:RPS:PDB   25->300 3c9rB PDBj 7e-31 21.6 %
:RPS:SCOP  4->120 2yyeA1  d.79.4.1 * 6e-17 18.4 %
:RPS:SCOP  144->311 2z1eA2  d.139.1.1 * 2e-17 26.2 %
:HMM:SCOP  9->141 1vqvA1 d.79.4.1 * 6.6e-23 34.1 %
:HMM:SCOP  142->313 1vqvA2 d.139.1.1 * 5.7e-28 32.3 %
:HMM:PFM   150->303 PF02769 * AIRS_C 1.4e-26 35.0 140/151  
:HMM:PFM   33->121 PF00586 * AIRS 7.5e-13 33.7 89/96  
:BLT:SWISS 4->288 Y676_METJA 2e-19 28.6 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID AAL63150.1 GT:GENE AAL63150.1 GT:PRODUCT hydrogenase expression/formation protein HypE GT:DATABASE GIB00076CH01 GT:ORG paer1 GB:ACCESSION GIB00076CH01 GB:LOCATION complement(555092..556072) GB:FROM 555092 GB:TO 556072 GB:DIRECTION - GB:PRODUCT hydrogenase expression/formation protein HypE GB:NOTE Protein fate; Protein modification and repair GB:PROTEIN_ID AAL63150.1 GB:DB_XREF GI:18159747 LENGTH 326 SQ:AASEQ MHLGKLPPEVLQRLVLSRRGAFRDEVLVNPAVGEDAAIIRLSGDKYLAVHTDPVTGSTRLIGYLAVYVPTNDIAVRGIEPMWLSVALLLPPSAREEDVDVITRQIDEAAKRLGVAVTGGHTEVTTAVTRPVAVVTAMGLGQRYVTTAGARPGDVVIMTKSAGQEAASILATDFREEALKRGIGADTLKKAEGLALEVSVVKEALALADIATAMHDPTEGGIANGLAEMAYASGVSIVVDRGRVVVYREVEALCKAFGIDPLETLSSGVLLAAVPRDRVREAESRLENLGVPYAVIGEVVPPREFLLRIGEKMYTKPFVADKLFTLF GT:EXON 1|1-326:0| BL:SWS:NREP 1 BL:SWS:REP 4->288|Y676_METJA|2e-19|28.6|269/335| SEG 121->136|tevttavtrpvavvta| SEG 234->249|vsivvdrgrvvvyrev| BL:PDB:NREP 1 BL:PDB:REP 31->299|2z1fA|3e-19|28.5|260/304| RP:PDB:NREP 1 RP:PDB:REP 25->300|3c9rB|7e-31|21.6|259/302| HM:PFM:NREP 2 HM:PFM:REP 150->303|PF02769|1.4e-26|35.0|140/151|AIRS_C| HM:PFM:REP 33->121|PF00586|7.5e-13|33.7|89/96|AIRS| RP:SCP:NREP 2 RP:SCP:REP 4->120|2yyeA1|6e-17|18.4|114/154|d.79.4.1| RP:SCP:REP 144->311|2z1eA2|2e-17|26.2|160/179|d.139.1.1| HM:SCP:REP 9->141|1vqvA1|6.6e-23|34.1|129/0|d.79.4.1|1/1|PurM N-terminal domain-like| HM:SCP:REP 142->313|1vqvA2|5.7e-28|32.3|158/0|d.139.1.1|1/1|PurM C-terminal domain-like| OP:NHOMO 354 OP:NHOMOORG 293 OP:PATTERN 1121212222222222211222211221-2121111111111112-11--112223244331112--- 1-1---------------------11------------11---2---------------------11------------111-1-11------1----------1--------------------111111-11111111-211-2211111---11-------1--1-11-----------------------111111---1-1----------1----------------------------------------------------------------------------------------------------------21111-------1-12-111---1-2---112211-11-1--311213--1-----------121-2---111-1------------------------------------1--------1------------------1-1---------------------------------1--------------------1--------1--22-----1-----1-1--------------------1--1-11-211111111211111111-11111-111----------1-1-------111-1--11---------11111-111111111111-----2-1------111111-1111111111-11111111111111111111111---11--1-1-1--11-111-1111111--1--------------------1111--1--1111-1-------------------1------------------1----------------------------------------------------------------------------------------------1- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 308 STR:RPRED 94.5 SQ:SECSTR ###cHccTTTTTTTTGGcGGGccTHHHTcccTTcccEEEEEcTTEEEEEEEEEEEcTTTcHHHHHHHHHHHHHHHTTcEEEEEEEEEEEcTTccHHHHHHHHHHHHHHHHHHTcEEEEEEEEEEEEccccEEEEEEEEEEccccccccccTTcEEEEcccccHHHHHHHHHTTTcccccccccHHHHHHHHHHHcccccGGGHHHHHHHccEEEEEcccHHHHHHHHHHHHHTcEEEEcGGGccccHHHHHHHHHHTccHHHHHHHcEEEEEEcGGGccTHHHHHHHHTcccEEEEEEEcccEEEEEETTE############### DISOP:02AL 326-327| PSIPRED ccHHHccHHHHHHHHHHHccccccccEEcccccccEEEEEccccEEEEEEEccccccHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHccccccHHHHHHHHHHHHHHHHHcccEEEcccEEEcccccccEEEEEEEEEccccccccccccccEEEEEccccHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHHHcEEEccccccHHHHHHHHHHHHcccEEEEEcccccccHHHHHHHHHccccHHHHHcccEEEEEEcHHHHHHHHHHHHHccccEEEEEEEEEccEEEEEEccEEEEcccccccccccc //