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Pyrobaculum aerophilum str. IM2 (paer1)
Gene : AAL63264.1
DDBJ      :             hypothetical protein
Swiss-Prot:             

Homologs  Archaea  9/68 : Bacteria  32/915 : Eukaryota  0/199 : Viruses  0/175   --->[See Alignment]
b.125.1c.1.28c.72.1d.350.1
:552 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   284->389 1oltA PDBj 4e-04 25.2 %
:RPS:PDB   211->460 3c8fA PDBj 1e-13 13.5 %
:RPS:SCOP  62->184 1dgmA  c.72.1.1 * 2e-04 18.2 %
:RPS:SCOP  233->311 2h7aA1  d.350.1.1 * 2e-05 11.0 %
:RPS:SCOP  291->451 1iwmA  b.125.1.2 * 7e-13 11.6 %
:HMM:SCOP  199->400 1oltA_ c.1.28.2 * 2.1e-24 28.2 %
:HMM:PFM   229->391 PF04055 * Radical_SAM 2.2e-18 25.0 156/166  
:HMM:PFM   38->149 PF02310 * B12-binding 5.5e-16 25.2 107/121  
:BLT:SWISS 48->391 BCHE_RHOCA 2e-15 25.9 %

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID AAL63264.1 GT:GENE AAL63264.1 GT:PRODUCT hypothetical protein GT:DATABASE GIB00076CH01 GT:ORG paer1 GB:ACCESSION GIB00076CH01 GB:LOCATION 657894..659552 GB:FROM 657894 GB:TO 659552 GB:DIRECTION + GB:PRODUCT hypothetical protein GB:NOTE Hypothetical GB:PROTEIN_ID AAL63264.1 GB:DB_XREF GI:18159870 LENGTH 552 SQ:AASEQ MPLHFDVALLHAPSVYDFRNLRRVHYGPISDVIPSRPVFDMYPVGFIYIVSYLEKRGVKTGIFNVAARMLNEPRLDVSKLLKGIKATLYAVDIHWLVHAHGAVEVAKLVKEIHGAPVAVGGFSATYYWREILEKYPFIDFVVLGDTTEPVIYQLLHAVERGDRGKLYEIPNLAFRDGDKLVNTGIRYIPQELDDLKPDYTAVARAMIRSGIRNSLPWSTFFKHPIAAVISYKGCPLNCLACGGSNYTYSAVFGRRGLGRKSPETLVEEFREITERLKIPVFFVGDLQYLGRRYLEEFAELLRRKKPSVELIFEFFTPPPREVLSLYRRAGDMVYLQISPESHDEDIRKHYGRPYDNSSLLEFIKNAAELRFERVDLYFMVGLPMQTPENVKGLGDFFLELAKRGGGALNAFVAPLAPFVDPGSPAFHNPSKYGYVILARSFEEHRRLLLAERWYMMLNYETTTMTRSQIAEATYNAVESLARAKYIAGIIDDEYLGAVLETVKNARSGAPPVGLNSKETVREEELYPKKFWISYLTPRSVAEIIRYSLGRLA GT:EXON 1|1-552:0| BL:SWS:NREP 1 BL:SWS:REP 48->391|BCHE_RHOCA|2e-15|25.9|313/575| BL:PDB:NREP 1 BL:PDB:REP 284->389|1oltA|4e-04|25.2|103/434| RP:PDB:NREP 1 RP:PDB:REP 211->460|3c8fA|1e-13|13.5|237/245| HM:PFM:NREP 2 HM:PFM:REP 229->391|PF04055|2.2e-18|25.0|156/166|Radical_SAM| HM:PFM:REP 38->149|PF02310|5.5e-16|25.2|107/121|B12-binding| RP:SCP:NREP 3 RP:SCP:REP 62->184|1dgmA|2e-04|18.2|121/346|c.72.1.1| RP:SCP:REP 233->311|2h7aA1|2e-05|11.0|73/109|d.350.1.1| RP:SCP:REP 291->451|1iwmA|7e-13|11.6|155/177|b.125.1.2| HM:SCP:REP 199->400|1oltA_|2.1e-24|28.2|195/0|c.1.28.2|1/1|Radical SAM enzymes| OP:NHOMO 51 OP:NHOMOORG 41 OP:PATTERN ----1-----------111-1--------------------------------2--------111--- -----------------------------------------------------------------------------------------------------------------------------11----11-1----11--------1--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------2-------------------------------------------------11-------------------------1--------------------------11111----------1-----1---------------------------------------------------------------------------------------1--------------------3-1-----------1321132------1--1--------------------------------------------------------------1--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 384 STR:RPRED 69.6 SQ:SECSTR ##############################################################################################HHHTTEEEEEEEEccEEEcccccEEcccEETTEcEEEcccTTcccccccEEEEEEEEEEEEEEEEEEEEEcccEEETTEEHHHHTTccTcTTcHEETTEEEccEEEEEETTTccEEEEEEEEEEcTTcccEEEEEEEcccccccTTcTHccGGGccTTccEEEcHHHHHHHHGGGHHHHTcTTcEEEEEEccGGGGHHHHHHHHHHHHTTTccEEEEEccccccccHHHHHHHHHHTccEEEEEcccccHHHHHHHHHccccHHHHHHHHHHHHHTccEEEEEEEcTTTTccHHHHHHHHHHHHHHccEEEEEEEEcccccEEccccHHHHHHTTcccTTTTcccccccHHHHHHHHHHHHTTTccHHHHHHHHHHHTTccccc########################################################################## DISOP:02AL 552-553| PSIPRED ccccccEEEEEccccccHHHcccccccccccccccccccccccHHHHHHHHHHHHccccEEEEEccccccccHHHHHHHHHHHccccEEEEEccccccHHHHHHHHHHHHHccccEEEEEcccccccHHHHHHHccccEEEEEcccccHHHHHHHHHHHHcccccHHHcccEEEEEccEEEEcccccccHHcccccccccHHHHHHHcccccccccccccccccEEEEEEEcccccccEEccccccccccccccccEEEccHHHHHHHHHHHHHHcccEEEEEEccccccHHHHHHHHHHHHHHccccEEEEEccccccHHHHHHHHHcccccEEEEccccccHHHHHHHcccccHHHHHHHHHHHHHcccccEEEEEEEEcccccHHHHHHHHHHHHHHHHHHcccEEEEEEEEEEEcccccHHHHHHHHHcccccHHHHHHHHHHHHccccccEEEEEEccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccHHHcccHHHHHHHHcccccHHHHHHHHHHccc //