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Pyrobaculum aerophilum str. IM2 (paer1)
Gene : AAL63314.1
DDBJ      :             paREP2b
Swiss-Prot:             

Homologs  Archaea  1/68 : Bacteria  0/915 : Eukaryota  0/199 : Viruses  0/175   --->[See Alignment]
d.264.1
:298 amino acids
:PSIPRED
:DISOPRED
:RPS:SCOP  128->285 1g71A  d.264.1.1 * 6e-18 12.8 %
:RPS:PFM   66->272 PF07775 * PaRep2b 5e-47 77.4 %
:HMM:PFM   1->286 PF07775 * PaRep2b 8e-144 72.3 285/512  
:BLT:SWISS 16->92 GLNA_LACSA 8e-04 41.8 %
:BLT:SWISS 110->286 SEC63_MOUSE 2e-04 25.7 %
:REPEAT 3|1->19|25->54|59->88

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID AAL63314.1 GT:GENE AAL63314.1 GT:PRODUCT paREP2b GT:DATABASE GIB00076CH01 GT:ORG paer1 GB:ACCESSION GIB00076CH01 GB:LOCATION complement(699818..700714) GB:FROM 699818 GB:TO 700714 GB:DIRECTION - GB:PRODUCT paREP2b GB:NOTE Hypothetical; Conserved within genome GB:PROTEIN_ID AAL63314.1 GB:DB_XREF GI:18159924 LENGTH 298 SQ:AASEQ MDALKARGLKESAHFTIREHDSYEIRVTKYAYSKTVEALAHSGLKEGEHYAVYSKWRIIRVKKDHKDAVVNALKGGGIEEGRDFTVRSGKQYEIYITSEGLREIQRMALNGDLEAEQFIRELEDVLRRRYGDDAAHKLIEVLTPAKEEGAVELPLAVRDDKGNLIARVVDLKYEFVENGQPVGQCAGEDCRLRVVVEYELPSGERRQFKMEWYWAEKREKKDQTTVTYYYEIARPTVKDDVEVAILRTLTGEAKRGQVRLNADQLDALRRFKALKDAIDQWREGKPQKQEVQNDNQQS GT:EXON 1|1-298:0| BL:SWS:NREP 2 BL:SWS:REP 16->92|GLNA_LACSA|8e-04|41.8|67/100| BL:SWS:REP 110->286|SEC63_MOUSE|2e-04|25.7|167/760| NREPEAT 1 REPEAT 3|1->19|25->54|59->88| RP:PFM:NREP 1 RP:PFM:REP 66->272|PF07775|5e-47|77.4|168/326|PaRep2b| HM:PFM:NREP 1 HM:PFM:REP 1->286|PF07775|8e-144|72.3|285/512|PaRep2b| RP:SCP:NREP 1 RP:SCP:REP 128->285|1g71A|6e-18|12.8|156/344|d.264.1.1| OP:NHOMO 16 OP:NHOMOORG 1 OP:PATTERN ------------------G------------------------------------------------- --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- DISOP:02AL 1-2, 283-298| PSIPRED cccHHcccccccEEEEEEEcccEEEEEEHHHHHHHHHHHHHHHHHccEEEEccccEEEEEEEcccHHHHHHHHHHccHHcccEEEEEcccEEEEEEEEHHHHHHHHHcccccHHHHHHHHHHHHHHHHccHHHHHHHHHHHHcccccHHHHHccEEEEcccccEEEEEEEEEEEEEEcccccHHcccccccEEEEEEEEccccEEEEEEEEEEEEccEEcccccEEEEEEEEEEEcccHHHHHHHHHHHccccEEEEEEEEHHHHHHHHHHHHHHHHHHHHHccccccHHHccccccc //