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Pyrobaculum aerophilum str. IM2 (paer1)
Gene : AAL63404.1
DDBJ      :             multiple sugar transport permease
Swiss-Prot:             

Homologs  Archaea  29/68 : Bacteria  429/915 : Eukaryota  1/199 : Viruses  0/175   --->[See Alignment]
f.58.1
:292 amino acids
:SECSTR
:PSIPRED
:BLT:PDB   9->207 3fh6F PDBj 8e-07 20.9 %
:RPS:PDB   188->226 3dhwA PDBj 2e-12 33.3 %
:RPS:SCOP  39->238 2r6gG1  f.58.1.1 * 4e-11 14.8 %
:RPS:PFM   176->259 PF00528 * BPD_transp_1 7e-07 33.3 %
:HMM:PFM   89->287 PF00528 * BPD_transp_1 2.3e-20 19.2 172/185  
:BLT:SWISS 22->262 Y1038_PYRHO 8e-60 44.8 %
:TM
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID AAL63404.1 GT:GENE AAL63404.1 GT:PRODUCT multiple sugar transport permease GT:DATABASE GIB00076CH01 GT:ORG paer1 GB:ACCESSION GIB00076CH01 GB:LOCATION complement(784651..785529) GB:FROM 784651 GB:TO 785529 GB:DIRECTION - GB:PRODUCT multiple sugar transport permease GB:NOTE Transport and binding proteins; Carbohydrates, organic alcohols, and acids GB:PROTEIN_ID AAL63404.1 GB:DB_XREF GI:18160021 LENGTH 292 SQ:AASEQ MNRKIQNYFVFLIPPLIFVGIFTIYPVFASFVYSFYTGSGFGLDNYIKVITDTNPLRALVMPKLDDTPPWGALIHNVVWIAIHVPLVTVLGLVLAYVLKYYVVGSNLVKGIVFIGMVIPPAIGGVIIRFMFDKDIGVVPIIFSALGIKELATTWINYPNLALYALILGSVWIWLGFAVTVFSAAIEAIPKSHIDAARVFGASDWHIFRRIVVPEVKPAVIIVVVMTALWDMKIFDIVFAATGGGPGGATNVLALVMYNYFARLLDYFRAATVAVILTALVVPFVIIAIRRWL GT:EXON 1|1-292:0| BL:SWS:NREP 1 BL:SWS:REP 22->262|Y1038_PYRHO|8e-60|44.8|239/291| TM:NTM 6 TM:REGION 9->31| TM:REGION 71->93| TM:REGION 108->130| TM:REGION 162->184| TM:REGION 219->241| TM:REGION 267->288| SEG 89->103|vlglvlayvlkyyvv| SEG 239->249|aatgggpggat| SEG 269->281|aatvaviltalvv| BL:PDB:NREP 1 BL:PDB:REP 9->207|3fh6F|8e-07|20.9|196/316| RP:PDB:NREP 1 RP:PDB:REP 188->226|3dhwA|2e-12|33.3|39/203| RP:PFM:NREP 1 RP:PFM:REP 176->259|PF00528|7e-07|33.3|84/195|BPD_transp_1| HM:PFM:NREP 1 HM:PFM:REP 89->287|PF00528|2.3e-20|19.2|172/185|BPD_transp_1| GO:PFM:NREP 3 GO:PFM GO:0005215|"GO:transporter activity"|PF00528|IPR000515| GO:PFM GO:0006810|"GO:transport"|PF00528|IPR000515| GO:PFM GO:0016020|"GO:membrane"|PF00528|IPR000515| RP:SCP:NREP 1 RP:SCP:REP 39->238|2r6gG1|4e-11|14.8|176/284|f.58.1.1| OP:NHOMO 1646 OP:NHOMOORG 459 OP:PATTERN 11--21--12111-2-4-2221--6--31-2-----------------------2332111221---- ---1M1-2222-11-2222-211125222222133313464-12AcJ-6861DAA-14--5473725EJE243337741---3-------------------------1---------------------------46654---73221311-11111111112221222--1-----1----A814347-73322222133-122111E7552422312716235345347f1-------------------22--11--11111--11---1-1-11-1-----11123323332223-------------211---111253--8111111131352--1221A-1121-5--23---1G---77471-1-------1--1---874---3132-45534555558---2--2-16C--NFFAUPHVXSOK-----5744234852--------1--1--11---------------------------------2--11114554443-1113343222111433-1----1114--22114348-------2--------------1----1-----1111---------11-112-------------------------------2-------4----------------------1----------333-2-1111111111-111111111111-11111-22222--1-1--------------2---1111--144444444444---------11111-65A--------------1------------------11-----1221---------------------222--111111111111-------------------1-111----------------------3HA866G696-1- --------------------------------------------------------------------------------------------------------------------------------------------------------------1---------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 217 STR:RPRED 74.3 SQ:SECSTR ########HccHHHHHHHHHHHTHHHHHHHHTTcccccccccHHHHHHHHHTcccTTHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTccccccHHHHHHHHHHHHHcccHHHHHHHHHHccccccHHHHHHHHHcccc###cccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccTTTTTHHHHHTccTHHHHHHTTHHHHHHHHHHHHHHHHH################################################################ PSIPRED ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHccHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHccccHHHHHHHHHHHHcHHHHHHHHHHHHHHHHccccHHHHHHccccccHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHcc //