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Pyrobaculum aerophilum str. IM2 (paer1)
Gene : AAL63414.1
DDBJ      :             cytochrome C oxidase assembly factor
Swiss-Prot:COXX1_PYRAE  RecName: Full=Protoheme IX farnesyltransferase 1;         EC=2.5.1.-;AltName: Full=Heme O synthase 1;AltName: Full=Heme B farnesyltransferase 1;

Homologs  Archaea  29/68 : Bacteria  514/915 : Eukaryota  57/199 : Viruses  0/175   --->[See Alignment]
d.151.1
:278 amino acids
:PSIPRED
:RPS:SCOP  139->200 1sr4B  d.151.1.1 * 7e-04 25.8 %
:RPS:PFM   15->200 PF01040 * UbiA 4e-10 30.4 %
:HMM:PFM   14->263 PF01040 * UbiA 1.1e-33 30.2 242/258  
:BLT:SWISS 1->260 COXX1_PYRAE e-108 100.0 %
:PROS 53->75|PS00943|UBIA
:TM
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID AAL63414.1 GT:GENE AAL63414.1 GT:PRODUCT cytochrome C oxidase assembly factor GT:DATABASE GIB00076CH01 GT:ORG paer1 GB:ACCESSION GIB00076CH01 GB:LOCATION complement(793267..794103) GB:FROM 793267 GB:TO 794103 GB:DIRECTION - GB:PRODUCT cytochrome C oxidase assembly factor GB:NOTE Energy metabolism; Electron transport GB:PROTEIN_ID AAL63414.1 GB:DB_XREF GI:18160032 LENGTH 278 SQ:AASEQ MSSYISLLKPRVIWLLILASVAGYIYGGGGVDSRLFSLLAVAFLSTGGSAAFNHYWERDIDALMTRTFKRPLPSGLITPNAALAYSLALSATGISLGFLLLGLLPGLFVLLGWLFYAVVYTIVLKRRTWLNIFGGGFAGNAVFLGGYALAKGTVDLPAVLISFAIYLWIPSHIWALAFKYRGDYKRAGVPMLPALIKEERAVAVISAINAAAAAYILWLYLQFGGGAGGALVALGVAATIATSIYAAVKKTEEAMWKMYKASSPILALFLIALILSRL GT:EXON 1|1-278:0| SW:ID COXX1_PYRAE SW:DE RecName: Full=Protoheme IX farnesyltransferase 1; EC=2.5.1.-;AltName: Full=Heme O synthase 1;AltName: Full=Heme B farnesyltransferase 1; SW:GN Name=ctaB1; OrderedLocusNames=PAE1333; SW:KW Cell membrane; Complete proteome; Heme biosynthesis; Membrane;Transferase; Transmembrane. SW:EXACT T SW:FUNC + BL:SWS:NREP 1 BL:SWS:REP 1->260|COXX1_PYRAE|e-108|100.0|260/278| GO:SWS:NREP 5 GO:SWS GO:0005886|"GO:plasma membrane"|Cell membrane| GO:SWS GO:0006783|"GO:heme biosynthetic process"|Heme biosynthesis| GO:SWS GO:0016020|"GO:membrane"|Membrane| GO:SWS GO:0016740|"GO:transferase activity"|Transferase| GO:SWS GO:0016021|"GO:integral to membrane"|Transmembrane| PROS 53->75|PS00943|UBIA|PDOC00727| TM:NTM 9 TM:REGION 5->27| TM:REGION 37->59| TM:REGION 78->100| TM:REGION 103->124| TM:REGION 128->150| TM:REGION 156->177| TM:REGION 201->223| TM:REGION 227->248| TM:REGION 257->278| SEG 81->91|aalayslalsa| SEG 96->115|lgflllgllpglfvllgwlf| SEG 201->214|avavisainaaaaa| SEG 224->238|gggaggalvalgvaa| SEG 261->277|asspilalflialilsr| RP:PFM:NREP 1 RP:PFM:REP 15->200|PF01040|4e-10|30.4|184/261|UbiA| HM:PFM:NREP 1 HM:PFM:REP 14->263|PF01040|1.1e-33|30.2|242/258|UbiA| GO:PFM:NREP 2 GO:PFM GO:0004659|"GO:prenyltransferase activity"|PF01040|IPR000537| GO:PFM GO:0016021|"GO:integral to membrane"|PF01040|IPR000537| RP:SCP:NREP 1 RP:SCP:REP 139->200|1sr4B|7e-04|25.8|62/258|d.151.1.1| OP:NHOMO 632 OP:NHOMOORG 600 OP:PATTERN 11---11-11111111-12121111--1-112-----------------------------21-1-22 -111111111111111111-111111111111111111111111111111111111111111111121111------------1-----------------1-11--11---------------11----------11111---11-111111111111111-1111111111111111111111111---111--------1-------1--11----11--11------11-11111111111111----1--------------------------------------------------------------------------------------------------1---1-----------------1-11111-11111111122111111-111-111111-111111111211111111111111111111111111111111111111111121-111111111111--111--------111111111-1111111111111111111111111111111111111111111111111112111121-------1111111------1---------1-111-------------------------------------1112111111111111111212111111111--11-11--11111111111111111111-1111111111111111111111111111111111111111111111-11-11-111111111111--1111111111111111-------------------------1111111222122221-1-----------1--1-----111111111111111111111--111111-----------------------------------------------1- -1----1-31----1-----------------------------------------------11--111111111--1--111111------------------------111--------------1-131-121-1--------11-----------111-11-11-11--1-----411---1121-1111----- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PSIPRED ccHHHHHHcHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHccccccccHHHcccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHccc //