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Pyrobaculum aerophilum str. IM2 (paer1)
Gene : AAL63450.1
DDBJ      :             aminopeptidase from family M42
Swiss-Prot:             

Homologs  Archaea  51/68 : Bacteria  315/915 : Eukaryota  1/199 : Viruses  0/175   --->[See Alignment]
b.49.3c.56.5
:362 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   6->346 1xfoB PDBj 9e-77 48.9 %
:RPS:PDB   5->347 2cf4A PDBj 2e-30 34.1 %
:RPS:SCOP  5->81 1yloA2  c.56.5.4 * 2e-20 27.3 %
:RPS:SCOP  69->157 1xfoA1  b.49.3.1 * 2e-24 53.8 %
:RPS:SCOP  139->358 1yloA2  c.56.5.4 * 6e-63 33.0 %
:HMM:SCOP  3->360 1yloA2 c.56.5.4 * 6.1e-67 43.0 %
:RPS:PFM   45->333 PF05343 * Peptidase_M42 2e-72 54.3 %
:HMM:PFM   45->340 PF05343 * Peptidase_M42 2.6e-109 52.2 289/292  
:BLT:SWISS 1->355 YSDC_BACSU 2e-79 45.1 %

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID AAL63450.1 GT:GENE AAL63450.1 GT:PRODUCT aminopeptidase from family M42 GT:DATABASE GIB00076CH01 GT:ORG paer1 GB:ACCESSION GIB00076CH01 GB:LOCATION 825595..826683 GB:FROM 825595 GB:TO 826683 GB:DIRECTION + GB:PRODUCT aminopeptidase from family M42 GB:NOTE Unclassified GB:PROTEIN_ID AAL63450.1 GB:DB_XREF GI:18160071 LENGTH 362 SQ:AASEQ MDDFVQLLKKLSEARGPSGFEDEVREVVIKEMEPYVDEVVVDRWGNVIGVKKGASNYRAMVAAHIDEIGLIIDHIEKEGFLRFRPIGGWNEITLVGQRVWVRASDGRWIRGVIGSTPPHVTPSGKEREAPEIKDMFIDIGASSKEEAEKIGVVIGSIAVLDREFAVLNGKVVTGKAFDDRVGVAVMLYTLRQLRDLPVTLYAVATVQEEVGLRGAQIAAEKINPHYAIALDTTIAADVPGVGERLHITKIGKGPAIKVLDGGRGGLFIAHPGLRDHIVKLAREAGIPYQLEVLYGGTTDAMAIAFRREGIPAATISIPTRYVHSPVEVLNVEDAVNASRLLKIVLERTTPDIVDKFLDKKVK GT:EXON 1|1-362:0| BL:SWS:NREP 1 BL:SWS:REP 1->355|YSDC_BACSU|2e-79|45.1|350/361| BL:PDB:NREP 1 BL:PDB:REP 6->346|1xfoB|9e-77|48.9|325/337| RP:PDB:NREP 1 RP:PDB:REP 5->347|2cf4A|2e-30|34.1|323/327| RP:PFM:NREP 1 RP:PFM:REP 45->333|PF05343|2e-72|54.3|282/292|Peptidase_M42| HM:PFM:NREP 1 HM:PFM:REP 45->340|PF05343|2.6e-109|52.2|289/292|Peptidase_M42| RP:SCP:NREP 3 RP:SCP:REP 5->81|1yloA2|2e-20|27.3|77/264|c.56.5.4| RP:SCP:REP 69->157|1xfoA1|2e-24|53.8|78/80|b.49.3.1| RP:SCP:REP 139->358|1yloA2|6e-63|33.0|215/264|c.56.5.4| HM:SCP:REP 3->360|1yloA2|6.1e-67|43.0|263/0|c.56.5.4|1/1|Zn-dependent exopeptidases| OP:NHOMO 666 OP:NHOMOORG 367 OP:PATTERN 111-11----------222222211111112111111111111111111111114343343---3--- --1------------11----1---1----------------------------------------------------111-2--------1----21-1-111112111---------------1--------1122211---14---------11------1---111-------------522--4414233333333333333334233333332222533333333413333333333333333223331-1-21-111----11---11-11122221112112222222222211111111111112221112222-343211111111113233411-1-3114-1--33-----1--363--1-1-1--------------------------------1-1--1------1-----------11------11------------------------------------------------------------------------------------------------------------------------------1-----------------111111111-------1------------------------------------------------------------1---------1------3221311122-2232221222222333332--------1111111111111111-2-12222-----------------------1111--1-----------------------------1111-1--1-1----------------------------------------------11--------------1-31-1---2--12--111----121114434434333113 -------------1----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 359 STR:RPRED 99.2 SQ:SECSTR GGccHHHHHHHHHccccTTccHHHHHHHHHTTTTcccTcEEcccccEEEcccccccccccEEEEccccEEEEEEEcTTccEEEEEEccccGGGTTTcEEEEEcHcccEEEEEccccccccccEccccccccTTccccccccccHHHHHTTccTTccEEEEccccEEccccEEEcTTHHHHHHHHHHHHHHHccGGGcccccEEEEcccTTTcHHHHHHTTTcccccEEEccEEEccccccTTccTTcccEEEEEccccccTTcTTccEEcHHHHHHHHHHHHTTTcccEEEEccccccGGGGTTHHTTcccEEEEEEEEEcTTTTTcEEEHHHHHHHHTTccTTTTTHHHHHHHHHHHc### DISOP:02AL 121-129, 361-362| PSIPRED cHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHccEEEEEcccEEEEEEccccccEEEEEEEcccccEEEEEEccccEEEEEEEccccHHHccccEEEEEcccccEEEEEEcccccEEEccccccccccccEEEEEEEcccHHHHHHHccccccEEEEccEEEEEcccEEEccccccHHHHHHHHHHHHHHHccccEEEEEEEccccccccHHHHHHHcccccHHHEEEccccccccccccccccccccccEEEEEEcccccccccccHHHHHHHHHHHHHccccEEEEEEcccccHHHHHHHccccccEEEEEcccccccccEEEEcHHHHHHHHHHHHHHHHHccHHHHHHHHHcccc //