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Pyrobaculum aerophilum str. IM2 (paer1)
Gene : AAL63457.1
DDBJ      :             branched-chain amino acid binding protein
Swiss-Prot:             

Homologs  Archaea  12/68 : Bacteria  217/915 : Eukaryota  2/199 : Viruses  0/175   --->[See Alignment]
c.93.1
:472 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   73->289 1usgA PDBj 1e-08 22.4 %
:RPS:PDB   75->445 3eafA PDBj 7e-32 14.7 %
:RPS:SCOP  73->439 1usgA  c.93.1.1 * 8e-43 17.2 %
:HMM:SCOP  73->447 1usgA_ c.93.1.1 * 5.8e-66 30.1 %
:RPS:PFM   102->409 PF01094 * ANF_receptor 3e-23 31.7 %
:HMM:PFM   115->429 PF01094 * ANF_receptor 2.6e-18 16.0 293/348  
:HMM:PFM   9->61 PF03748 * FliL 0.00078 8.3 48/149  
:BLT:SWISS 68->465 LIVB5_BRUSU 1e-46 31.0 %
:TM
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID AAL63457.1 GT:GENE AAL63457.1 GT:PRODUCT branched-chain amino acid binding protein GT:DATABASE GIB00076CH01 GT:ORG paer1 GB:ACCESSION GIB00076CH01 GB:LOCATION complement(831147..832565) GB:FROM 831147 GB:TO 832565 GB:DIRECTION - GB:PRODUCT branched-chain amino acid binding protein GB:NOTE Transport and binding proteins; Amino acids, peptides and amines GB:PROTEIN_ID AAL63457.1 GB:DB_XREF GI:18160078 LENGTH 472 SQ:AASEQ MANAKTLWIVAAVVATIIVGALAWLATQTPAQTPTTPPTTPSPTPTTPKVTTTPPTTTPTPTPTTTQAGECPDEIVIGTAMPISGRYAAEGQYSLWGALAVVNWINDQGGLDCGGKKVKVRLIYRDSESKLELAQSITEALITQDKVHFLLSPYGSDLALGVSPIAEKYGVIMAVVGASSDRIFQQGFMYVIGVAAPASQYMVPVLDMIVKKDPSVKKVAILYRDSEFNRQVAEGAKAYAEKLGLQVAVYEVYPSSPKDLTPQILKVKQAAPDVIIVASHFADGQLAVQQLAEQKVDAKIIALSVAPLVPDFYNALKEKAECIVGPSHWEPGVKYTPDLAKQRGVEWFGPTREEFIQYFKKVAKQMGGQEVEPGYHAAWAAEGVLTILYGVQKAMSVKSDKVLSVLQKARFMTFFSEFKLDPTTNLNVAHSMAVIQWQDGSRVVVWPPDVAEGKLVYPALTWDQKASGQRCK GT:EXON 1|1-472:0| BL:SWS:NREP 1 BL:SWS:REP 68->465|LIVB5_BRUSU|1e-46|31.0|381/406| TM:NTM 3 TM:REGION 6->28| TM:REGION 158->180| TM:REGION 184->206| SEG 9->21|ivaavvatiivga| SEG 27->67|tqtpaqtpttppttpsptpttpkvtttpptttptptptttq| BL:PDB:NREP 1 BL:PDB:REP 73->289|1usgA|1e-08|22.4|210/345| RP:PDB:NREP 1 RP:PDB:REP 75->445|3eafA|7e-32|14.7|348/379| RP:PFM:NREP 1 RP:PFM:REP 102->409|PF01094|3e-23|31.7|278/319|ANF_receptor| HM:PFM:NREP 2 HM:PFM:REP 115->429|PF01094|2.6e-18|16.0|293/348|ANF_receptor| HM:PFM:REP 9->61|PF03748|0.00078|8.3|48/149|FliL| RP:SCP:NREP 1 RP:SCP:REP 73->439|1usgA|8e-43|17.2|338/345|c.93.1.1| HM:SCP:REP 73->447|1usgA_|5.8e-66|30.1|346/0|c.93.1.1|1/1|Periplasmic binding protein-like I| OP:NHOMO 572 OP:NHOMOORG 231 OP:PATTERN 22----------------111111----1--1---------------1----------------2--- ---1---------------------1--------------1--1------------------2-1-2---1----111----1--------------------------------------------1-11--2---1122---13---3--1--11---1--1-111-1-------------21-211--------------------------------1---------2------------------------------------------------------------------------------------------1----21111111-1--------------1-------13----1---1112-1-----------2A542114356355555663654---8--A-5211-42212234112249---1----11-----------4----412-----------------------------1-----5B9764456662222155533333136573342-1333---22222365211-----------------13164-217245333412-21-42-12122---9---------------------2-----11--1----------------------------------------1--1-------------------------------111---------------------1--------------------------------------1-------------------------2-11112112211111112----------------------------------------1-------------------------------------------1-----2----2- -------------------------------------------------------------------------------------------------------------------------------------------------------------------1---------------------1------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 377 STR:RPRED 79.9 SQ:SECSTR ####################################################################EEEccEEEEEEEEccccTTHHHHHHHHHHHHHHHHHHHHHcEEcTTccEEEEEEEEEEcTTcHHHHHHHHHHHHHTTcccEEEEccHHHHHHHHHHHHHHHTcEEEEccccGGGTTcTTEEcccEccccHHHHHHHHHHHHHHHHccEEEEEEEcTTcHHHHTTHHHHHHHTGGGTEEEEEEEEccTccHHHHHHHHHHHTTcccEEEEcccHHHHHHHHHHHHHHTcccEEEEcGGGcccTTHHHHHcGGGTTcEEEEEccEEEEGGGcccHHTcccGGcTTcHHHHHHHHHHHTTccGGGccHHHHHHHHHHHHHHHHHHHTTccHHHHHHHTHHHHHHHHHcccccccccTTTcccccccEEEEEEcTTccEEE########################### DISOP:02AL 1-2, 32-51, 467-472| PSIPRED ccHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHcccccccccEEEEEEEcccccHHHHHHHHHHHHHHHHHHHHHcccccccccEEEEEEEEEcccccHHHHHHHHHHHHHccccEEEEccccHHHHHHHHHHHHHcccEEEEEccccccccccccccEEEEccccHHHHHHHHHHHHHHcccccEEEEEEEccHHHHHHHHHHHHHHHHccccEEEEEEEccccHHHHHHHHHHHHccccEEEEEEccHHHHHHHHHHHHccccccEEEEEcccccHHHHHHHHHHHccEEEEccccccHHHcccccHHcccccccHHHHHHHHHHHHHHcccccccccccHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHcccccccEEEEEEcccccccccccEEEEEEEccEEEEEccccccccccccccccccccccccccc //