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Pyrobaculum aerophilum str. IM2 (paer1)
Gene : AAL63569.1
DDBJ      :             NADH-ubiquinone oxidoreductase subunit
Swiss-Prot:             

Homologs  Archaea  22/68 : Bacteria  225/915 : Eukaryota  2/199 : Viruses  0/175   --->[See Alignment]
:412 amino acids
:PSIPRED
:DISOPRED
:RPS:PFM   118->248 PF00361 * Oxidored_q1 3e-06 33.1 %
:HMM:PFM   147->339 PF00361 * Oxidored_q1 1.7e-24 31.5 181/270  
:BLT:SWISS 95->248 NUON_ERWT9 2e-15 31.2 %
:TM
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID AAL63569.1 GT:GENE AAL63569.1 GT:PRODUCT NADH-ubiquinone oxidoreductase subunit GT:DATABASE GIB00076CH01 GT:ORG paer1 GB:ACCESSION GIB00076CH01 GB:LOCATION complement(918884..920122) GB:FROM 918884 GB:TO 920122 GB:DIRECTION - GB:PRODUCT NADH-ubiquinone oxidoreductase subunit GB:NOTE Energy metabolism; Electron transport GB:PROTEIN_ID AAL63569.1 GB:DB_XREF GI:18160199 LENGTH 412 SQ:AASEQ MIDLIAYLVLALSLAAPAALKIDGRYIAVVASLALLILSAFLKLPIGVVVSLIALSLSIDWRLGTFGLALAFSAVATVLAAYVYYAAQPVVYGLIALALVTAAVYGLLAMGRARENVEGAAKYLVFSGVGKVLIVLGYVLGVSGLPQGLYITILGFMFELGIAPFHAWVVDAYALSSPRGAAALAAFSKVTALFVLLSIFRSASAPREVGLIALIVALVSMLVANVAGLTAKTLGRIMAYSSIAHMSYALAAVALVWWLGEPANSPNLFGVRVSAADLAVLVVVLEALASGLAKAGVFGYLSTYLSDLSPPRRSVLNVLNVLSLLGLPPLLGFWPKLFLVLLILAYPQPWLAAFLVAWVVLNSALATPYYLRAIRIIAEAPGPLADNVTSSYTALATTALGLVLPLVWLTLL GT:EXON 1|1-412:0| BL:SWS:NREP 1 BL:SWS:REP 95->248|NUON_ERWT9|2e-15|31.2|154/485| TM:NTM 13 TM:REGION 1->23| TM:REGION 31->53| TM:REGION 64->86| TM:REGION 90->112| TM:REGION 121->143| TM:REGION 152->174| TM:REGION 180->202| TM:REGION 209->231| TM:REGION 242->264| TM:REGION 275->297| TM:REGION 319->341| TM:REGION 350->372| TM:REGION 390->412| SEG 4->20|liaylvlalslaapaal| SEG 27->40|iavvaslallilsa| SEG 74->92|avatvlaayvyyaaqpvvy| SEG 249->259|alaavalvwwl| SEG 271->293|vrvsaadlavlvvvlealasgla| SEG 314->332|svlnvlnvlsllglppllg| SEG 393->411|talattalglvlplvwltl| RP:PFM:NREP 1 RP:PFM:REP 118->248|PF00361|3e-06|33.1|130/268|Oxidored_q1| HM:PFM:NREP 1 HM:PFM:REP 147->339|PF00361|1.7e-24|31.5|181/270|Oxidored_q1| GO:PFM:NREP 3 GO:PFM GO:0008137|"GO:NADH dehydrogenase (ubiquinone) activity"|PF00361|IPR001750| GO:PFM GO:0042773|"GO:ATP synthesis coupled electron transport"|PF00361|IPR001750| GO:PFM GO:0055114|"GO:oxidation reduction"|PF00361|IPR001750| OP:NHOMO 262 OP:NHOMOORG 249 OP:PATTERN ------1--------121121221-------1----------------1-112--1-21--1--1-11 1------------------------------------1---11-----------------11---1----------------11------1-----------1--1-------------------1-11-1111-1---1-111-----------------------------------------1----1-1-11111--1-1-1-1-------11---1--------------------------------------------------------------------------------------------------------------------------------------------------------11---------------11----111111111111----1-------11---1------11--1--1-----------------111-1---------------------1----------------1----------------------------111---111---------1--111--111---------1-1-1---1----11----1111--2----1--1-1-11-------1-1---------1-2--1-1---------------------1-1--11--1-1-------1----111111111111-1111111111111111111--------1111111111111111111111111-111111111111-1-111111----1-------------------1111111111--11112111-2222-111111111111-------------------------------1-11-----------------------------------------1----------- --------------------------------------------------------------------------------------------------------------------------1-1-------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- DISOP:02AL 53-53,55-74,412-413| PSIPRED cHHHHHHHHHHHHHHcccHHHcccHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHcHHHccccHHHHHHHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccccHHHHHHHHHHc //