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Pyrobaculum aerophilum str. IM2 (paer1)
Gene : AAL63652.1
DDBJ      :             D-arabino 3-hexulose 6-phosphate formaldehyde lyase, conjectural
Swiss-Prot:             

Homologs  Archaea  54/68 : Bacteria  178/915 : Eukaryota  0/199 : Viruses  0/175   --->[See Alignment]
c.1.2
:216 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   1->213 3f4wA PDBj 1e-24 35.7 %
:RPS:PDB   29->203 3barA PDBj 3e-09 13.3 %
:RPS:SCOP  3->203 1kv8A  c.1.2.3 * 2e-43 29.6 %
:HMM:SCOP  1->217 1kv8A_ c.1.2.3 * 2.6e-30 28.3 %
:HMM:PFM   1->204 PF00215 * OMPdecase 2.5e-20 20.7 198/223  
:BLT:SWISS 1->213 HPS_BACSU 9e-29 38.6 %

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID AAL63652.1 GT:GENE AAL63652.1 GT:PRODUCT D-arabino 3-hexulose 6-phosphate formaldehyde lyase, conjectural GT:DATABASE GIB00076CH01 GT:ORG paer1 GB:ACCESSION GIB00076CH01 GB:LOCATION 983907..984557 GB:FROM 983907 GB:TO 984557 GB:DIRECTION + GB:PRODUCT D-arabino 3-hexulose 6-phosphate formaldehyde lyase, conjectural GB:NOTE Energy metabolism; Sugars GB:PROTEIN_ID AAL63652.1 GB:DB_XREF GI:18160288 LENGTH 216 SQ:AASEQ MKLQVALDLVDLRKAVNLARELCSVGAEMIEAGTPLIKLYGMASVSAIKSACPKAEVVADIKTADVGGLEARLAREFGADWGTVLGMTNLETIVEFIKEGKAVGLKTAVDLIGSRDPEGRAQEILKAARPDLFIVHLGVDVQTRTGMRFEDLLEIALKIKNMGVGVAVAGGITERELELIIKRGAQVDVVVVGRSIVNDTSPASKFVMMNNILKHI GT:EXON 1|1-216:0| BL:SWS:NREP 1 BL:SWS:REP 1->213|HPS_BACSU|9e-29|38.6|207/210| BL:PDB:NREP 1 BL:PDB:REP 1->213|3f4wA|1e-24|35.7|207/211| RP:PDB:NREP 1 RP:PDB:REP 29->203|3barA|3e-09|13.3|173/323| HM:PFM:NREP 1 HM:PFM:REP 1->204|PF00215|2.5e-20|20.7|198/223|OMPdecase| RP:SCP:NREP 1 RP:SCP:REP 3->203|1kv8A|2e-43|29.6|196/213|c.1.2.3| HM:SCP:REP 1->217|1kv8A_|2.6e-30|28.3|212/0|c.1.2.3|1/1|Ribulose-phoshate binding barrel| OP:NHOMO 305 OP:NHOMOORG 232 OP:PATTERN 111111111111111111111112--------11111112111222222122211111111---1--- --------------------------------------2----------11-1-1---11---1-----------------------------------------1---------------------------------------------------------------------------------------1---------------1-1111-----1-11--------1111111111122111211131---12---------11----11---1111111-11111111111111111111111111111---1111---11-----------------------------------------------1---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------221----------------------------------------------------------------------------1----------------------------------------2-11---2112222222-1222222222123222222221-1---212222223222322211111121---------------------------3----1111121-1-11112------------------------------------------1--------11-----------------------------------------1--11--111--1--1---------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 216 STR:RPRED 100.0 SQ:SECSTR cGEEEEEccccHHHHHHHHHHHGTTTccEEEEEGGGTcTTTHHHHHHHHHHHHHHHEEEEEEEccHHHHHHHHHTTccccEEEEccTTccGGGGGTcEETTTTEEcEEEEEEEcccTTTHHHHTTcEETTEEHHHHHHHHTTTGGGTccEEEEEcTTcEEEccccTTcccHHHHHHHHccccGGGccEEEEEcHHHHTcccHHHHHHHHHHHHHTT DISOP:02AL 145-147| PSIPRED cEEEEEEccccHHHHHHHHHHHcccccEEEEEcHHHHHHccHHHHHHHHHHccccEEEEEEEEccccHHHHHHHHHccccEEEEEEcccHHHHHHHHHHHHHcccEEEEEEcccccHHHHHHHHHHHHcccEEEEEEccHHHcccccccHHHHHHHHHHccccccEEEcccccHHHHHHHHHccccccEEEEccHHHccccHHHHHHHHHHHHHHc //