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Pyrobaculum aerophilum str. IM2 (paer1)
Gene : AAL63677.1
DDBJ      :             propionate catabolism protein prpD
Swiss-Prot:             

Homologs  Archaea  22/68 : Bacteria  247/915 : Eukaryota  102/199 : Viruses  0/175   --->[See Alignment]
e.44.1
:453 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   60->404 1szqA PDBj 4e-17 28.1 %
:RPS:SCOP  2->452 1szqA  e.44.1.1 * 1e-74 24.2 %
:HMM:SCOP  1->453 1szqA_ e.44.1.1 * 9.1e-124 39.5 %
:RPS:PFM   5->426 PF03972 * MmgE_PrpD 4e-59 37.3 %
:HMM:PFM   2->438 PF03972 * MmgE_PrpD 6.5e-124 37.0 427/445  
:BLT:SWISS 14->433 PRPD1_CORGL 7e-44 31.2 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID AAL63677.1 GT:GENE AAL63677.1 GT:PRODUCT propionate catabolism protein prpD GT:DATABASE GIB00076CH01 GT:ORG paer1 GB:ACCESSION GIB00076CH01 GB:LOCATION 1003035..1004396 GB:FROM 1003035 GB:TO 1004396 GB:DIRECTION + GB:PRODUCT propionate catabolism protein prpD GB:NOTE Central intermediary metabolism; Other GB:PROTEIN_ID AAL63677.1 GB:DB_XREF GI:18160314 LENGTH 453 SQ:AASEQ MDKITKILAEYTESVDYSKVPLEVRHEVKRRIIDSIAVAFAAYSAEPVVLSRRAASKFAVRKGARILGTRYEVAPDWATFVNGLMIRYHDYNDTYLSKEPLHPSDLIGAALAVGDYVEARGTDLITAVAIGYEASVTFCDGGTLRKRGWDHVNFLGIGSVLASAKLLGLDAVKTQHALSIYAVPHAAMRQTRVGELSMWKGAAAANSSRNAVFAALLAQEGFTGPYKPFEGEMGFFRQLLQGDFDVSVLSGIEAKNPPRRILDTYIKPYPVEYHAQTAVEAALRLREKVRIEEIEKIRIDTYEAAYTIIGPKDPEKWDPHTKETADHSLMWITAAAFVWGPIKIEHYKDIRNPAVLTLMKKIEVNLDPELDKLYPQAFPTVITVYTKGGAKYTERVDYAKGHPKNPMTDAELEAKFTALTQDILPEEVRGKVLQMLWRLEDYNIKDIIEALVA GT:EXON 1|1-453:0| BL:SWS:NREP 1 BL:SWS:REP 14->433|PRPD1_CORGL|7e-44|31.2|420/498| SEG 283->299|lrlrekvrieeiekiri| BL:PDB:NREP 1 BL:PDB:REP 60->404|1szqA|4e-17|28.1|331/461| RP:PFM:NREP 1 RP:PFM:REP 5->426|PF03972|4e-59|37.3|413/436|MmgE_PrpD| HM:PFM:NREP 1 HM:PFM:REP 2->438|PF03972|6.5e-124|37.0|427/445|MmgE_PrpD| GO:PFM:NREP 2 GO:PFM GO:0019543|"GO:propionate catabolic process"|PF03972|IPR005656| GO:PFM GO:0047547|"GO:2-methylcitrate dehydratase activity"|PF03972|IPR005656| RP:SCP:NREP 1 RP:SCP:REP 2->452|1szqA|1e-74|24.2|442/473|e.44.1.1| HM:SCP:REP 1->453|1szqA_|9.1e-124|39.5|443/473|e.44.1.1|1/1|2-methylcitrate dehydratase PrpD| OP:NHOMO 482 OP:NHOMOORG 371 OP:PATTERN 11----1111111111-11111----------1-1--------------------------111---- -11--1-13321-111111-1---12111111-----1-11112111--11-211111--111---1---------------4--------------------------------------------------------------1---------------------------------------------1-2111111111111111111121111---11---------1-------------------------------------------------------------------------------------------------------------------------------2--------------------------122--1-1-------------1------1-2231--------2----1--1---1--33---111111112-----11-----------------------------1------88541111111222211242222-2416--31-2--1-----1--111111--1-1----------1---11-----------------1-1------------1---111-1-1--------------11--1--1111----------------------1111------1-1-1--1111111111-11-1111111111-1-111-----2111111111111111111-------------------------1111111111-111-----------------------11-1-11111111-1111-----------------2----------11--------------------------------------------------------------------1-- ----11-------1-21112222444511111111-111111111122113211111111111--11-1-11---111-11--------1411111----111----------1----1--1------1241-11211-1111111111-1---111-1-------------------1811-------1--------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 416 STR:RPRED 91.8 SQ:SECSTR ####HHHHHHHHHHHHTccccHHHHHHHHHHHHHHHHHHHTcTTcHHHHHHHHHHHHHTcTTcEEcTTcccEEcHHHHHHHHHHHHHHTcccccccccccccGGGGHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTcccGGGTccTHHHHHHHHHHHHHHHTTccHHHHHHHHHHHHTccccccGGGcTTcccTHHHHHHHHHHHHHHHHHHHHTTcccTTTTTcTTTcHHHHHcTTccccccccccHHHHccccccccccccccccTTTHHHHHHHHHHHTTccGGGEEEEEEEEcHHHHHHHccccccccccccHHHHTTcHHHHHHHHHHHccccGGGGcHHTcHHHHHHHHTEEEEEcHHHHHHHTccccEEEEEEETTccccccEEcccTTcGGccccHHHHHHHHHHHT################################# DISOP:02AL 453-454| PSIPRED ccHHHHHHHHHHHcccHHHccHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHcccccccEEEEccccccHHHHHHHHHHHHHHHccccccccccccccHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHcccccccccccccccHHHHHHHHHHHHccccHHHHHHHHHHHHcccHHHHHHHcccccccccccccHHHHHHHHHHHHHHcccccccccccccccHHHHHHcccccHHHcccccccccHHHHHcccEEccccHHHHHHHHHHHHHHHHcccHHHEEEEEEEEEcHHEEEcccccccccccccHHHHHHcHHHHHHHHHHcccccHHHccccccHHHHHHHHHcEEEEcccccHHHHHHcccEEEEEEccccEEEEEEccccccccccccHHHHHHHHHHHHcccccHHHHHHHHHHHHccccccHHHHHHHHcc //