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Pyrobaculum aerophilum str. IM2 (paer1)
Gene : AAL63752.1
DDBJ      :             ribosomal protein S6 modification protein (rimK)
Swiss-Prot:             

Homologs  Archaea  51/68 : Bacteria  229/915 : Eukaryota  2/199 : Viruses  0/175   --->[See Alignment]
d.142.1
:299 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:RPS:PDB   125->295 1a9xA PDBj 3e-10 14.0 %
:RPS:SCOP  125->299 1glvA2  d.142.1.1 * 8e-13 15.3 %
:HMM:SCOP  110->298 1gsaA2 d.142.1.1 * 2.6e-51 43.6 %
:RPS:PFM   125->276 PF08443 * RimK 6e-19 34.2 %
:HMM:PFM   109->293 PF08443 * RimK 5.6e-41 33.0 185/190  
:BLT:SWISS 21->293 MPTN_METMA 2e-21 30.9 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID AAL63752.1 GT:GENE AAL63752.1 GT:PRODUCT ribosomal protein S6 modification protein (rimK) GT:DATABASE GIB00076CH01 GT:ORG paer1 GB:ACCESSION GIB00076CH01 GB:LOCATION 1070265..1071164 GB:FROM 1070265 GB:TO 1071164 GB:DIRECTION + GB:PRODUCT ribosomal protein S6 modification protein (rimK) GB:NOTE Protein synthesis; Ribosomal proteins: synthesis and modification GB:PROTEIN_ID AAL63752.1 GB:DB_XREF GI:18160395 LENGTH 299 SQ:AASEQ MKIGIVRPYEVEFNLGDVADLEEAIKKRGHIPIRIYVDMLEVRIGGGGVAVRQAVGRGQPEEVDVPGAILRHLGIFRDFEQFLYRVWAARALEESGAYVMNPVLPWVVAGDKMAALMKLAKAGLPVPPTVVTENMFVGYRAVAEFGRAVVKQMRGAMGYGVFLVDNPDVAFHIFSALVNLNKPIYVQKFLEKGSGDYRVVVVGGRVIGAEYRRGEGWKTNVAQGAKPEPARATPQMEELAVRAVEALGLDYGGVDIAETSDGYYILEVNPTMSWQGFKQATGINPAEHIVDYLLEKIKK GT:EXON 1|1-299:0| BL:SWS:NREP 1 BL:SWS:REP 21->293|MPTN_METMA|2e-21|30.9|272/324| SEG 45->59|ggggvavrqavgrgq| SEG 109->124|agdkmaalmklakagl| SEG 198->206|rvvvvggrv| RP:PDB:NREP 1 RP:PDB:REP 125->295|1a9xA|3e-10|14.0|171/1058| RP:PFM:NREP 1 RP:PFM:REP 125->276|PF08443|6e-19|34.2|152/177|RimK| HM:PFM:NREP 1 HM:PFM:REP 109->293|PF08443|5.6e-41|33.0|185/190|RimK| RP:SCP:NREP 1 RP:SCP:REP 125->299|1glvA2|8e-13|15.3|163/177|d.142.1.1| HM:SCP:REP 110->298|1gsaA2|2.6e-51|43.6|181/192|d.142.1.1|1/1|Glutathione synthetase ATP-binding domain-like| OP:NHOMO 348 OP:NHOMOORG 282 OP:PATTERN 1112112122222221-434333-1--11132---11111112-1--112212-121-1--2--1-12 ----1------------------------------------------1--------1-----------------------------------------------1--1----------------------------111-----12-11-111----1-----1------1------------111------------------------------------1--------------------------------------------------------------------------------------------------------------------------------------------------------2----------1-----------------------11111111------------------1111------1--------------1---------------------------------1-----------------------1--------1----------1-------1-----111-----------------1-111--12-----------1-112111--1-------------------1----1111-111-1211333332213333231-311---2111------1111-1-1111111111-111111111111111111111111---111111111111111111111111-----------------111111111111211111-11111111111----------1111111111111111111---------21111111111111111-1111111--------------------------------------------------------------- -------------------------------------------------------------------------------------------------------------1------------------------------------------------------------------------------------1---- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 220 STR:RPRED 73.6 SQ:SECSTR ##############################################################################ccGTTcHHHHHHHHHTTcEEccccHHHHHHTTcHHHHHHHHHHTTcccccEEEEccHHHHHHHHHHHcccEEEETTccTTTTcEEEccHHHHHHHHHHHHHHTccEEEEEccEEEEEEEEcTTccEEEEEEEEEcccTTccGGGccEEEccccccHHHHHHHHHHHHHHTcccEEEEEcTTTccEEEEEEEccccHHHHHHHHcccHHHHHHHHHTTHHc# DISOP:02AL 299-300| PSIPRED cEEEEEcccccccccHHHHHHHHHHHHcccEEEEEEccccEEEEccccHHHHHHccccccccccccEEEEEcccccccHHHHHHHHHHHHHHHHcccEEEccHHHHHHHccHHHHHHHHHHcccccccEEEEccHHHHHHHHHHcccEEEEEcccccccEEEEEccHHHHHHHHHHHHHccccEEEEEcccccccEEEEEEEccEEEEEEEEcccccccEEccccEEccccccHHHHHHHHHHHHHHcccEEEEEEEEEccEEEEEEEcccccHHHHHHHHcccHHHHHHHHHHHHHcc //