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Pyrobaculum aerophilum str. IM2 (paer1)
Gene : AAL63911.1
DDBJ      :             pleiotropic regulatory protein, conjectural
Swiss-Prot:             

Homologs  Archaea  36/68 : Bacteria  631/915 : Eukaryota  22/199 : Viruses  0/175   --->[See Alignment]
c.67.1
:404 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   17->387 1mdzA PDBj 2e-53 37.1 %
:RPS:PDB   16->399 3dr4C PDBj 9e-52 35.8 %
:RPS:SCOP  27->399 1o61A  c.67.1.4 * 7e-84 24.8 %
:HMM:SCOP  12->402 1b9hA_ c.67.1.4 * 1.1e-106 42.2 %
:RPS:PFM   24->396 PF01041 * DegT_DnrJ_EryC1 4e-83 50.1 %
:HMM:PFM   23->395 PF01041 * DegT_DnrJ_EryC1 2.4e-118 49.0 351/363  
:BLT:SWISS 18->403 Y1066_METJA 5e-74 42.3 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID AAL63911.1 GT:GENE AAL63911.1 GT:PRODUCT pleiotropic regulatory protein, conjectural GT:DATABASE GIB00076CH01 GT:ORG paer1 GB:ACCESSION GIB00076CH01 GB:LOCATION complement(1211822..1213036) GB:FROM 1211822 GB:TO 1213036 GB:DIRECTION - GB:PRODUCT pleiotropic regulatory protein, conjectural GB:NOTE Regulatory functions; General GB:PROTEIN_ID AAL63911.1 GB:DB_XREF GI:18160567 LENGTH 404 SQ:AASEQ MLAIEGGKPVRETPIVARPAVYSEEVLQAIAEVLKSGVLTAQHGKWVKAFEAELASYLGVRYAAAVSNGTTALHTALKAIGVGPGDEVITTPFTFAASATAVLHANAVPVFADIDRETLNLDPASVEERITDKTKAVVVVHLAGMPAEMDQFMKLAERYGVKIIEDAAQALGAEYRGRRAGSIGHVSAFSFYATKHITSGEGGAVATDIAAYAERAKLIRAHGEVGKYSYELLGYNYRMTEIQGVLAYYQLKQLPEMERRREAYVKALLEELAPLEGDLITVPRPRPYMKHAWHLVQILLAVEKLKKPRDYVVEALRAEGVGNAFVAYPVPLYKTPLFQRQEGHGLGCPWTCPYYKRRVEYKPLPNAEWAAERVVSLLVMPNLTEQDALDTAAAFKKVLSHLRR GT:EXON 1|1-404:0| BL:SWS:NREP 1 BL:SWS:REP 18->403|Y1066_METJA|5e-74|42.3|362/386| SEG 90->101|ttpftfaasata| BL:PDB:NREP 1 BL:PDB:REP 17->387|1mdzA|2e-53|37.1|345/364| RP:PDB:NREP 1 RP:PDB:REP 16->399|3dr4C|9e-52|35.8|360/368| RP:PFM:NREP 1 RP:PFM:REP 24->396|PF01041|4e-83|50.1|349/358|DegT_DnrJ_EryC1| HM:PFM:NREP 1 HM:PFM:REP 23->395|PF01041|2.4e-118|49.0|351/363|DegT_DnrJ_EryC1| RP:SCP:NREP 1 RP:SCP:REP 27->399|1o61A|7e-84|24.8|347/374|c.67.1.4| HM:SCP:REP 12->402|1b9hA_|1.1e-106|42.2|377/0|c.67.1.4|1/1|PLP-dependent transferases| OP:NHOMO 1686 OP:NHOMOORG 689 OP:PATTERN -----1--1-------1311111----2-1--222-1211--112-1414-11111-1-12---1-12 266-5---11----1--22-2---2-21222-----22112335-41-----223-----62316353-5---------231-113419433-711---43445334717--------------23233222344145575---2-4431444122222121214213364422222234122---1-222--4--1-111--1-1-3---4443-1312-1211------22---------------2--1-------------1-----1-----------------11111111111-----------------------111353334444533--33311--3412-121332334311-1--21---221433311111115424322112322222222221-21221415321-----3425453133122222--222421111111121112A12-----------------------------23-11-333233223222222211234444242243233124326223-2313221241-217311111111-21213325424435665448449538532333-35355531443453131111111441342241-112223113223251222222332143---2222------23232322332222322-32222222323223323322225876232333333332333322211222321233333323333--1-444442222311-31112-21----2--1-1111111311-212125521--222322211111111342111111112-131-23333223------73667779--------211-------------------------2233322222251 -------------1-------11212-------111--------------1---------------------------------------------------------2-------------------------------------------------1----2----------1---3F--2-----1---1-1--13 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 404 STR:RPRED 100.0 SQ:SECSTR HHHHHTTccTTTcccccccccccccHHHHHHHHHHHTccccccccHHHHHHHHHHHHHTccEEEEEccHHHHHHHHHHHTTccTTcEEEEEccccTHHHHHHHHTTcEEEEEcccTTTccccHHHHGGGccTTEEEEccccGGGccccHHHHHHHHHHTTcEEEEEcTTcTTcEETTEETTccccEEEEEccTTccccccccEEEEEccHHHHHHHHHHHcTTccTTTccccccccccccHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHGGGGGGGEEccccccTTcccccccEEEEEccTTccccHHHHHHHHHHTTcccEEccccGGGcGcccGGGcHHHHHccccccGGGGGGccccccHHHHHHHHHEEEEcccTTccHHHHHHHHHHHHHHcHHHHH DISOP:02AL 403-404| PSIPRED cEEEEccccccccccccccccccHHHHHHHHHHHHccEEEcccccHHHHHHHHHHHHHcccEEEEEccHHHHHHHHHHHHccccccEEEEccccHHHHHHHHHHcccEEEEEEcccccccccHHHHHHHHcccccEEEEEccccccccHHHHHHHHHHcccEEEEEcHHHcccccccEEEcccccEEEEEEccccEEEccccEEEEEccHHHHHHHHHHHHccccccEEEEEccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccEEEccccccccccEEEEEEEEEEcccccccHHHHHHHHHHcccEEEEEEEcccccccHHHHHHcccccccccccccccccccccccHHHHHHHHcEEEccccccccHHHHHHHHHHHHHHHHHHcc //