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Pyrobaculum aerophilum str. IM2 (paer1)
Gene : AAL64221.1
DDBJ      :             acyl-CoA dehydrogenase
Swiss-Prot:             

Homologs  Archaea  30/68 : Bacteria  536/915 : Eukaryota  166/199 : Viruses  0/175   --->[See Alignment]
a.29.3e.6.1
:378 amino acids
:SECSTR
:PSIPRED
:BLT:PDB   13->377 2jifB PDBj 3e-55 33.4 %
:RPS:PDB   13->365 3d9dB PDBj 9e-78 20.5 %
:RPS:SCOP  13->213 1siqA2  e.6.1.1 * 1e-51 30.3 %
:RPS:SCOP  227->373 1bucA1  a.29.3.1 * 2e-34 43.2 %
:HMM:SCOP  4->237 1w07A3 e.6.1.2 * 1.2e-63 39.3 %
:HMM:SCOP  222->373 2c12A1 a.29.3.1 * 5.2e-50 48.0 %
:RPS:PFM   5->114 PF02771 * Acyl-CoA_dh_N 4e-16 35.5 %
:RPS:PFM   118->168 PF02770 * Acyl-CoA_dh_M 5e-11 52.9 %
:RPS:PFM   227->364 PF00441 * Acyl-CoA_dh_1 3e-30 50.4 %
:HMM:PFM   224->371 PF00441 * Acyl-CoA_dh_1 7.3e-55 46.3 147/150  
:HMM:PFM   12->114 PF02771 * Acyl-CoA_dh_N 1.3e-26 41.7 103/113  
:HMM:PFM   118->169 PF02770 * Acyl-CoA_dh_M 3.8e-22 46.2 52/52  
:BLT:SWISS 5->364 ACDS_CLOAB 2e-57 35.5 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID AAL64221.1 GT:GENE AAL64221.1 GT:PRODUCT acyl-CoA dehydrogenase GT:DATABASE GIB00076CH01 GT:ORG paer1 GB:ACCESSION GIB00076CH01 GB:LOCATION 1476652..1477788 GB:FROM 1476652 GB:TO 1477788 GB:DIRECTION + GB:PRODUCT acyl-CoA dehydrogenase GB:NOTE Fatty acid and phospholipid metabolism; Degradation GB:PROTEIN_ID AAL64221.1 GB:DB_XREF GI:18160902 LENGTH 378 SQ:AASEQ MGWSEYEVSLKIIREFVNQYVRTRARDIDRGAYPRDIIRKLGELNFLAPTLPPEFGGAGADTLTHILVVEELARASPGVATIMEIQSSMIAENIYHNGTKRMKEEILPKVAAGEVIVAFALSEPCCGSDAAAIRTRAEKIGGEWVINGHKMWITSGLYADYYLLFARTGPLEARHKAITAFLIPRSNCVEATPIEVMGVRGTGTAEVKFNSCKAGDEDVVGEVNGGWSVAMWGINMGRLNVGAIGLGIAEEAFYQAYDYAHKREAFGRLIADFQAIQHYLAEMYARVEALRALVYKTAKMRDENHPDFPLYAQVAKLMGSRTAVETARLAVQILGGYGYSTDSHVEMLYRDAKVTEIYEGTNEIILNTIYKFLKSKFT GT:EXON 1|1-378:0| BL:SWS:NREP 1 BL:SWS:REP 5->364|ACDS_CLOAB|2e-57|35.5|358/379| SEG 215->226|gdedvvgevngg| BL:PDB:NREP 1 BL:PDB:REP 13->377|2jifB|3e-55|33.4|362/377| RP:PDB:NREP 1 RP:PDB:REP 13->365|3d9dB|9e-78|20.5|352/431| RP:PFM:NREP 3 RP:PFM:REP 5->114|PF02771|4e-16|35.5|110/113|Acyl-CoA_dh_N| RP:PFM:REP 118->168|PF02770|5e-11|52.9|51/53|Acyl-CoA_dh_M| RP:PFM:REP 227->364|PF00441|3e-30|50.4|137/150|Acyl-CoA_dh_1| HM:PFM:NREP 3 HM:PFM:REP 224->371|PF00441|7.3e-55|46.3|147/150|Acyl-CoA_dh_1| HM:PFM:REP 12->114|PF02771|1.3e-26|41.7|103/113|Acyl-CoA_dh_N| HM:PFM:REP 118->169|PF02770|3.8e-22|46.2|52/52|Acyl-CoA_dh_M| GO:PFM:NREP 6 GO:PFM GO:0003995|"GO:acyl-CoA dehydrogenase activity"|PF02771|IPR006092| GO:PFM GO:0055114|"GO:oxidation reduction"|PF02771|IPR006092| GO:PFM GO:0003995|"GO:acyl-CoA dehydrogenase activity"|PF02770|IPR006091| GO:PFM GO:0055114|"GO:oxidation reduction"|PF02770|IPR006091| GO:PFM GO:0016627|"GO:oxidoreductase activity, acting on the CH-CH group of donors"|PF00441|IPR006090| GO:PFM GO:0055114|"GO:oxidation reduction"|PF00441|IPR006090| RP:SCP:NREP 2 RP:SCP:REP 13->213|1siqA2|1e-51|30.3|195/236|e.6.1.1| RP:SCP:REP 227->373|1bucA1|2e-34|43.2|146/151|a.29.3.1| HM:SCP:REP 4->237|1w07A3|1.2e-63|39.3|234/0|e.6.1.2|1/1|Acyl-CoA dehydrogenase NM domain-like| HM:SCP:REP 222->373|2c12A1|5.2e-50|48.0|152/0|a.29.3.1|1/1|Acyl-CoA dehydrogenase C-terminal domain-like| OP:NHOMO 6917 OP:NHOMOORG 732 OP:PATTERN 55----6888A88977-243532EA6661-7C-----------------------------5771--- 4556X3-5111635W*nPP-Pm44qrPPPPPbsqzqbo**4j9j1133-11-667668--IGU1EGSMJOF--------384B-----11111122---41445464545--------------------------67688---B312-1-----------------123-------------78867--1D746666646656666664466656667BA9A11------54-111111-11111111---1--1------------------------------------------------------------------111315444444444423222221-6-315-13-B91599-17---11-3-71-PKKU-----41XMO454QHTQLAA9A9AA7978-44B44F4CAAY-4663646667678GATBACE7777D9G11111111B----9A6-----------------------------1NMVL18UJDQDEGIRFA7BBBBBOHGGGGBITAaWupm35HIDD7EGGQGIMSa239----56-------211H884fIF-----------765-B-5--7787CA66------------1--------1-----32-7E486FA15444448D555485D7476---1-1-------315111-3334344333-3333333323333333332111--111433144444342422412231122--1---1-----1----6111116665-ID33---------------IIHFICI7988-OOPQBLDFJFCFFF769--1-1--1-----2-----24-225755555555-------2CCA9CC----------1-------------------------1--11-1------ ----679-841-AA9DAB9C9A8B8ACBC88987789989899BAA977789BE786667774---------1----------------7B7A8776555888CCC-B75HDUABEE9988AD9IB6I9Q*D-EBQ6985C79GA49A79C63FACBAN9EG7HBD877BCEIBG2233Z32354656F93544E8879 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 376 STR:RPRED 99.5 SQ:SECSTR #TccHHHHHHHHHHHHHHHTGGGHHHHHTHHHHTHHHHHHHHHTTTTGGGccGGGTcccccHHHHHHHHHHHHHHccTTHHHHHHHHHHHHHHHHHcccHHHHHHHHGGGGcccccEEEEcccTTccTTccccccEEEEETTEEEEEEEEEccTTTTTTTTEEEEEEEcccTTcGGGEEEEEEcHHHHHTcccccccccTTccccEEEEEEEEEEGGGccccTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccTTcccGGGcHHHHHHHHHHHHHHHHHHHHHHHHHHHHTcTTccHHHHHHHHHHHHHHHHHHHHHHHHHHHcGGGGcTTccHHHHHHHHTTTTTccccTTTTHHHHHHHHHHHc# PSIPRED ccccHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHcccccccccHHHccccccHHHHHHHHHHHHccccHHHHHHHcccHHHHHHHHHcccHHHHHHHHHHHccccEEEEEEcccccccccHHHcEEEEEEEccEEEEEEEEEEEcccccccEEEEEEEccccccccccEEEEEEEccccEEEEEEccccccccccEEEEEccEEccHHHHccccccHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHc //