[GTOP] [HELP] [ORGANISMS] [SEARCH] [SUMMARY]
Pyrobaculum aerophilum str. IM2 (paer1)
Gene : AAL64264.1
DDBJ      :             conserved hypothetical protein
Swiss-Prot:             

Homologs  Archaea  16/68 : Bacteria  23/915 : Eukaryota  0/199 : Viruses  0/175   --->[See Alignment]
c.14.1
:282 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   54->172 3bppA PDBj 4e-13 36.8 %
:RPS:PDB   53->171 2cbyB PDBj 3e-12 21.6 %
:RPS:SCOP  49->120 1on3A2  c.14.1.4 * 7e-08 23.6 %
:HMM:SCOP  26->172 1tg6A1 c.14.1.1 * 4.4e-15 23.6 %
:RPS:PFM   53->141 PF01972 * SDH_sah 2e-07 35.4 %
:HMM:PFM   52->135 PF01972 * SDH_sah 8.4e-09 32.5 77/286  
:BLT:SWISS 54->117 YQEZ_BACSU 9e-08 38.7 %
:TM
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID AAL64264.1 GT:GENE AAL64264.1 GT:PRODUCT conserved hypothetical protein GT:DATABASE GIB00076CH01 GT:ORG paer1 GB:ACCESSION GIB00076CH01 GB:LOCATION 1514264..1515112 GB:FROM 1514264 GB:TO 1515112 GB:DIRECTION + GB:PRODUCT conserved hypothetical protein GB:NOTE Hypothetical; Conserved GB:PROTEIN_ID AAL64264.1 GB:DB_XREF GI:18160948 LENGTH 282 SQ:AASEQ MSWTKALLLALAIPAWAFAASEAVALYLDGVIDGTAVTLASAALAEAQRLHLPLVVIIDTYGGFLAPMDQIVEMFLNAGVPVYAYIPDGAKAMSAGAFIAMSARKIYMAPTAEIGAAEPRPPDPKVVNYAAARMRALASTKWNDTRLYIAESFVRENRVLTGAEAARLGMAEPPPPDGWNFVSVLRRDPLSRLLNALSDPALISLMLLLGVVLIGYELFASGFQGVGVIGGVLLVLAFYLLGQLGSEWLWAALALGGAVLIAAEMFAVLSFFQAFLKGEEKR GT:EXON 1|1-282:0| BL:SWS:NREP 1 BL:SWS:REP 54->117|YQEZ_BACSU|9e-08|38.7|62/100| TM:NTM 4 TM:REGION 14->36| TM:REGION 198->220| TM:REGION 224->246| TM:REGION 252->274| SEG 6->20|alllalaipawafaa| SEG 35->47|tavtlasaalaea| SEG 202->215|lislmlllgvvlig| SEG 225->236|gvgviggvllvl| SEG 248->263|wlwaalalggavliaa| BL:PDB:NREP 1 BL:PDB:REP 54->172|3bppA|4e-13|36.8|117/216| RP:PDB:NREP 1 RP:PDB:REP 53->171|2cbyB|3e-12|21.6|116/170| RP:PFM:NREP 1 RP:PFM:REP 53->141|PF01972|2e-07|35.4|82/207|SDH_sah| HM:PFM:NREP 1 HM:PFM:REP 52->135|PF01972|8.4e-09|32.5|77/286|SDH_sah| RP:SCP:NREP 1 RP:SCP:REP 49->120|1on3A2|7e-08|23.6|72/264|c.14.1.4| HM:SCP:REP 26->172|1tg6A1|4.4e-15|23.6|144/0|c.14.1.1|1/1|ClpP/crotonase| OP:NHOMO 40 OP:NHOMOORG 39 OP:PATTERN ----1-----------1-111-11---------------------------1--11111111------ ------------------------------------------------------------------------------------------------------------------------------------------------11------------------------------------------1---------------------------------------------------------------------------------------------------------------------------------------1------------------------------1-------2--111-----1-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1-----1-------1-1-------1-----1------------------------------------------------------------------------------------------------------------------------------------------------------------------1111------------------------------------1----1-1------------------------------------------------------------------------------------------------------ ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 144 STR:RPRED 51.1 SQ:SECSTR ####################################################cEEEEEEEccccHHHHHHHHHHHHHccccEEEEEEEEEEEETHHHHHHHTccTTEEcTTcEEEcccccHHHHHHHHHHHHHHHHHHHHHHTccHHHHHHHHHTTccEEEHHHHHHHTccHHHHHHHHHHHHHHHTccHHHHccH###################################################################################### DISOP:02AL 279-282| PSIPRED ccHHHHHHHHHHHccccccccEEEEEEEEccccHHHHHHHHHHHHHHHcccccEEEEEEcccccHHHHHHHHHHHHHccccEEEEEcccccHHHHHHHHHHHccHHHcccccEEEEcccccccHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHcccccHHHHHHHHHHHHHHccHHHHHHHHcccHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccc //