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Pyrobaculum aerophilum str. IM2 (paer1)
Gene : AAL64277.1
DDBJ      :             asparaginyl-tRNA synthetase
Swiss-Prot:             

Homologs  Archaea  68/68 : Bacteria  532/915 : Eukaryota  189/199 : Viruses  0/175   --->[See Alignment]
d.104.1
:348 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   39->340 1x54A PDBj 3e-42 33.8 %
:RPS:PDB   3->340 3bjuD PDBj 1e-24 17.9 %
:RPS:SCOP  36->344 1nnhA  d.104.1.1 * 4e-62 36.0 %
:HMM:SCOP  23->343 1bbuA2 d.104.1.1 * 3e-55 31.1 %
:RPS:PFM   25->340 PF00152 * tRNA-synt_2 1e-29 35.0 %
:HMM:PFM   25->341 PF00152 * tRNA-synt_2 1.7e-62 29.3 297/323  
:BLT:SWISS 39->340 SYN_PYRKO 3e-43 34.5 %

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID AAL64277.1 GT:GENE AAL64277.1 GT:PRODUCT asparaginyl-tRNA synthetase GT:DATABASE GIB00076CH01 GT:ORG paer1 GB:ACCESSION GIB00076CH01 GB:LOCATION 1525307..1526353 GB:FROM 1525307 GB:TO 1526353 GB:DIRECTION + GB:PRODUCT asparaginyl-tRNA synthetase GB:NOTE Protein synthesis; tRNA aminoacylation GB:PROTEIN_ID AAL64277.1 GB:DB_XREF GI:18160962 LENGTH 348 SQ:AASEQ MPIHPSVTELEKLVIDKESYKRMLEEWLKYSWRWAVNEKYKLVFKVQASILRALREFLDSKGFVEVLSPIIGPVTDPGIRGAKQASIDFYGAEYKVMSSAILYKQYMARVLGKIYFVSPNIRLEPPDSIFTGRHLVEFYQLDLEMYKATYHEAMDLAEDLITYVVKYVKDVHGKELEAVLGRQLYEFKRPFKRYSHKEAVEFVNKLGCENSPREELRWECEKVMSAHHDSPFFVYDYPRGSRGFYDREDPERPGVLRDFDMLYPEGFGEAISGAEREFEPERLVERIREGGEDPAKYQWFLQMAKELYPLQTAGFGIGVERLTRYICGLRAVWEARPYPKVAGIIGGP GT:EXON 1|1-348:0| BL:SWS:NREP 1 BL:SWS:REP 39->340|SYN_PYRKO|3e-43|34.5|296/431| BL:PDB:NREP 1 BL:PDB:REP 39->340|1x54A|3e-42|33.8|296/434| RP:PDB:NREP 1 RP:PDB:REP 3->340|3bjuD|1e-24|17.9|329/499| RP:PFM:NREP 1 RP:PFM:REP 25->340|PF00152|1e-29|35.0|297/337|tRNA-synt_2| HM:PFM:NREP 1 HM:PFM:REP 25->341|PF00152|1.7e-62|29.3|297/323|tRNA-synt_2| GO:PFM:NREP 6 GO:PFM GO:0000166|"GO:nucleotide binding"|PF00152|IPR004364| GO:PFM GO:0004812|"GO:aminoacyl-tRNA ligase activity"|PF00152|IPR004364| GO:PFM GO:0005524|"GO:ATP binding"|PF00152|IPR004364| GO:PFM GO:0005737|"GO:cytoplasm"|PF00152|IPR004364| GO:PFM GO:0006412|"GO:translation"|PF00152|IPR004364| GO:PFM GO:0006418|"GO:tRNA aminoacylation for protein translation"|PF00152|IPR004364| RP:SCP:NREP 1 RP:SCP:REP 36->344|1nnhA|4e-62|36.0|278/293|d.104.1.1| HM:SCP:REP 23->343|1bbuA2|3e-55|31.1|309/342|d.104.1.1|1/1|Class II aaRS and biotin synthetases| OP:NHOMO 1542 OP:NHOMOORG 789 OP:PATTERN 11313122222222224333334111111111111111111111111111112133333333333122 211-1--------------------------------------1-1---111------11--1---------------1--1---11222221222111222121221111-------------2---------1-21111---111111111-111------111-1111------------22122111121222222121222222111121222121-1111111111-111111111111111111121212112122122111111111111111111111111111111111111111111111111111111111-2133333333323111442343331221-2-1222221211-111-2111-1----------------------------------------------2--11--111-1---------------------------------------------------------------------------------------------------------------------1------------------1121111211222221111111111111121-1-1-------------------1-1---1121111211121111111111121111111----1-11111122222123333334333-333333333333333333333321222222222222222222222222223111111111111111122-----2222--1--222222221122322----------------1----1-1-----111111111-1111111111121122212112222222--1-2222111111111111111111-11111112221111111112222211111-11 3422332-72223333353343333333333333323333233333323333252233344333333324333333313333333333-47332424442324334236342625441-413333412-2D2-22321--4214322-223-15233333493433-334453233223S4332244A54733464343 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 344 STR:RPRED 98.9 SQ:SECSTR ccEEEEEEEEEEccccccccccHHHHHHcHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHHTTcEEcccccEEcccccccccccEEEETTTTEEEEEccccHHHHHHHHTTccEEEEEEEEEccccccTccccTcccEEEEEEEEEETccHHHHHHHHHHHHHHHHHHHHcccEEEEcTTcccEEEEcccccEEEEHHHHHHHHHTcccccGGGTTcHHHHHHHHHHGccccEEEEcccGGGcTTcccccccTTcccEEEEEETTETTEEEEEEEEccccHHHHHHHHHHHHHHHHccHHHHHHHHHHccccEEEEEEEHHHHHHHHTTcccGGGTccccccTTc#### DISOP:02AL 345-348| PSIPRED ccccccHHHccccccccccccccccHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHcccEEEcccccccccccccccccccccccccHHHHHcccHHHHHHHHHHHcccEEEEEcEEEcccccccccccccccEEEEEEEEccccHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHccccccccccccEEEHHHHHHHHHHcccccccccHHHHHHHHHHHHcccccEEEEEccHHHHHHHcccccccHHHHHHHHHHHcccEEEcccHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHccccccEEEcccccccccccc //