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Pyrobaculum aerophilum str. IM2 (paer1)
Gene : AAL64389.1
DDBJ      :             conserved hypothetical protein
Swiss-Prot:             

Homologs  Archaea  40/68 : Bacteria  232/915 : Eukaryota  123/199 : Viruses  0/175   --->[See Alignment]
a.102.1c.1.9c.47.1
:667 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   27->77 3fk8A PDBj 3e-05 40.0 %
:BLT:PDB   249->315 3gt5A PDBj 8e-04 29.9 %
:RPS:PDB   22->153 2c1yB PDBj 2e-10 5.6 %
:RPS:PDB   224->559 1clcA PDBj 8e-18 8.4 %
:RPS:SCOP  24->166 1j5sA  c.1.9.8 * 2e-10 9.0 %
:RPS:SCOP  269->560 1clcA1  a.102.1.2 * 1e-17 10.0 %
:HMM:SCOP  24->147 1uc7A_ c.47.1.1 * 3e-22 29.6 %
:HMM:SCOP  189->509 1fp3A_ a.102.1.3 * 5e-42 34.5 %
:HMM:SCOP  459->561 1vd5A_ a.102.1.7 * 8e-07 31.2 %
:RPS:PFM   24->131 PF03190 * DUF255 4e-26 39.8 %
:RPS:PFM   140->196 PF04905 * NCD2 2e-04 38.6 %
:HMM:PFM   7->166 PF03190 * DUF255 1.1e-62 46.9 160/163  
:HMM:PFM   476->559 PF01532 * Glyco_hydro_47 4e-05 25.3 79/453  
:BLT:SWISS 8->655 YYAL_BACSU 2e-76 31.7 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID AAL64389.1 GT:GENE AAL64389.1 GT:PRODUCT conserved hypothetical protein GT:DATABASE GIB00076CH01 GT:ORG paer1 GB:ACCESSION GIB00076CH01 GB:LOCATION complement(1611632..1613635) GB:FROM 1611632 GB:TO 1613635 GB:DIRECTION - GB:PRODUCT conserved hypothetical protein GB:NOTE Hypothetical; Conserved GB:PROTEIN_ID AAL64389.1 GB:DB_XREF GI:18161081 LENGTH 667 SQ:AASEQ MDARERCLSSSSSPFVLEGLKSRVKWWGWCKEAFEAAEREDKPVLVDVGAVWCHWCHVMDERTYNDEEVAEFINKHFIPVKVDRDERPDVDRRLQEAAQLISGQSGWPLTVFMTPKGQVIWAATYLPPRREMGLPGMLEVLEAVLRAYREKRGEVEKFHEDLARELKKWHSPSPGEPRREGQAEVLAALAASFDEEYGGFGGAPKFPPITQLELLMMRHFYDGVGIYGKMAERTLDAMALGGVYDQLLGGFFRYSTDRSWLIPHYEKLLIDNAELLAVYTKAYRQFGKALYKRTAEGIVKWLDEFMRAPEGGYYASQDADVDGEEGGYYRWSLEELKELLGELYPVASKHFGLEEYPWPEGKATLRVARPLEGPEAERIYQILIEARRKRKPPFTDTTVYVGWSCAMAYAELLASRLASVGNKYHAVRTLERFGVELGQRGRLPRGFRGGGPVGIAALEDYAYCILAWIEGYSHTAKLEFLKVAESAGEILLAKFLEEGGFKDVETVDEIIPTPNYPALDTPNFSGNAVAAIALATLSEVTGDAKYKEAAYRAVSALYGKMERVGPAASGLWIALDLLTLGVPRTVIVGESPELITAALRAYRPWHVVVPITGNWPYKDPAVRAMLNGPKPAAYICAGGACSLPVREPERLEKTIEEFMKTKYALPL GT:EXON 1|1-667:0| BL:SWS:NREP 1 BL:SWS:REP 8->655|YYAL_BACSU|2e-76|31.7|637/689| SEG 80->93|vkvdrderpdvdrr| SEG 333->343|leelkellgel| SEG 437->454|lgqrgrlprgfrgggpvg| BL:PDB:NREP 2 BL:PDB:REP 27->77|3fk8A|3e-05|40.0|50/130| BL:PDB:REP 249->315|3gt5A|8e-04|29.9|67/391| RP:PDB:NREP 2 RP:PDB:REP 22->153|2c1yB|2e-10|5.6|124/128| RP:PDB:REP 224->559|1clcA|8e-18|8.4|335/541| RP:PFM:NREP 2 RP:PFM:REP 24->131|PF03190|4e-26|39.8|108/126|DUF255| RP:PFM:REP 140->196|PF04905|2e-04|38.6|57/154|NCD2| HM:PFM:NREP 2 HM:PFM:REP 7->166|PF03190|1.1e-62|46.9|160/163|DUF255| HM:PFM:REP 476->559|PF01532|4e-05|25.3|79/453|Glyco_hydro_47| GO:PFM:NREP 3 GO:PFM GO:0005634|"GO:nucleus"|PF04905|IPR006989| GO:PFM GO:0016481|"GO:negative regulation of transcription"|PF04905|IPR006989| GO:PFM GO:0016564|"GO:transcription repressor activity"|PF04905|IPR006989| RP:SCP:NREP 2 RP:SCP:REP 24->166|1j5sA|2e-10|9.0|134/451|c.1.9.8| RP:SCP:REP 269->560|1clcA1|1e-17|10.0|290/441|a.102.1.2| HM:SCP:REP 24->147|1uc7A_|3e-22|29.6|115/0|c.47.1.1|1/1|Thioredoxin-like| HM:SCP:REP 189->509|1fp3A_|5e-42|34.5|310/0|a.102.1.3|1/2|Six-hairpin glycosidases| HM:SCP:REP 459->561|1vd5A_|8e-07|31.2|96/0|a.102.1.7|2/2|Six-hairpin glycosidases| OP:NHOMO 448 OP:NHOMOORG 395 OP:PATTERN 11----1111111111-111---122222122--1-------111-1111111--------111--11 11111---------11111-11--1111111111111111111111---11-1-11-1--11111111111-----------111122--------2-----1111211111111111111111111-111--11111111---11111111111--------1-111111------------11111---1-1-----------------1111-------11------------------------------------------------------------------------------------------------------111111111-1-11111----11--1--1-11-1--1111--------1----------11---111-----11111-11111---------111-------------11---------------------1---1111------------------------------------------------------------------1------1-----1------11------------111----111-1-1-1-111-11111111211111111--------------------1-122-------------------------------1---11-2--------------------------------------------------------------------------------------------1---------1-1-------------------------------------------------------1---1----------------------------111111----------------------------------------------12- ----11--------11111111111-1111111111111111111111111111111111111--------------------------12-1---111----11--1-122111111111111111313I1-3131111211111111-1--111121-----1121114311---1-----111--1111------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 564 STR:RPRED 84.6 SQ:SECSTR #HHHHHHHHHHHHHHccccccTTcccccccGGGHHHHHTTcccEEEEEEccccHHHHTTHHHHHHHHHHHHTTccTTTTccEEEEEETTTccHHHHTTHTTcTcccccccEEEcccccccccEEccccccHHHHHHTTccccccccccccHHHHHHHccccccEEEEcccccHHHHHHHHHHHHTcTccccccccccTTTTTTTccTccccccccccccccccEEEEETHTTTEEEEEEEcTTccccEEEEEEETTTEEcccEEEcTTTTHHHHHHHHHHHHHTcccccEEEEETTEEEEEccccTTccccTccccccccEEHHHHHHHHHHHHHHHHHcHHHHTcGGGGccccHHHHHHHHHHHHHHTTccTTcccccEEcccccGGGcccccEEEEEcHHHHHHHHHHHHHHHHHHTTTcHHHHHHHHHHHHHHHHcccccccccTTcccccccccccHHHHHHHHHHHHHHHccHHHHHHHHHHHHTccccccccccTTccHHHHHHHccTTTTcccTTHHHHHHHTHHHHHHHHHHcccHHHHHHHHHHHHHHHTTTcccc###################################################################################################### DISOP:02AL 1-4, 8-9, 166-179| PSIPRED cccccccccccccccHHHccccccccccccHHHHHHHHHccccEEEEEEccccHHHHHHcHHHcccHHHHHHHHcccEEEEEEcccccHHHHHHHHHHHHHcccccccEEEEEcccccEEEEEEEEccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccHHHHHHHHHHHHHHHHHHccccccccccccHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHcccEEEccccEEEEEEcccccccHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHccccccEEEHHHcccccccccEEEccHHHHHHHccccHHHHHHHccccccccccccEEEcccccccHHHHHHHHHHHHHHHHccccccccccEEHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHcccccEEEEEEEccccccccccHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHcccccccccccccccccEEccccccccccccHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHccccEEEEEcccHHHHHHHHHcccccEEEEEEcccccHHHHHHHHHccccccEEEEEcccccccccccHHHHHHHHHHHHHccccccc //