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Pyrobaculum aerophilum str. IM2 (paer1)
Gene : AAL64403.1
DDBJ      :             paREP5a
Swiss-Prot:             

Homologs  Archaea  2/68 : Bacteria  0/915 : Eukaryota  0/199 : Viruses  0/175   --->[See Alignment]
a.29.13h.1.5
:153 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   35->133 3ghgJ PDBj 5e-04 28.1 %
:RPS:SCOP  47->123 3dbyA2  a.29.13.1 * 4e-04 17.3 %
:HMM:SCOP  30->140 1c1gC_ h.1.5.1 * 0.00025 18.0 %
:RPS:PFM   45->134 PF07888 * CALCOCO1 2e-05 25.6 %
:HMM:PFM   7->65 PF06667 * PspB 0.0001 25.4 59/75  
:HMM:PFM   47->133 PF01576 * Myosin_tail_1 3.4e-06 19.5 87/859  
:BLT:SWISS 40->133 YQO3_SCHPO 1e-06 18.1 %
:TM
:COIL
:REPEAT 2|58->85|86->113
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID AAL64403.1 GT:GENE AAL64403.1 GT:PRODUCT paREP5a GT:DATABASE GIB00076CH01 GT:ORG paer1 GB:ACCESSION GIB00076CH01 GB:LOCATION 1626952..1627413 GB:FROM 1626952 GB:TO 1627413 GB:DIRECTION + GB:PRODUCT paREP5a GB:NOTE Hypothetical; Conserved within genome GB:PROTEIN_ID AAL64403.1 GB:DB_XREF GI:18161097 LENGTH 153 SQ:AASEQ MGVINFDIVLSSLVAQAPLVAVAVLILYYTLDKRIDKVKADLGGRIDKLENTVEGLSNRMERLENSVVNLNNRVEKLEGLFAEMKSRFEELRSSVADVRGRVERLDGLFAELRNRVDLIGARLNAVRRDVRSLGRGFYTYALIDFLASKGVVN GT:EXON 1|1-153:0| BL:SWS:NREP 1 BL:SWS:REP 40->133|YQO3_SCHPO|1e-06|18.1|94/396| COIL:NAA 66 COIL:NSEG 1 COIL:REGION 36->101| TM:NTM 1 TM:REGION 6->28| NREPEAT 1 REPEAT 2|58->85|86->113| SEG 9->27|vlsslvaqaplvavavlil| BL:PDB:NREP 1 BL:PDB:REP 35->133|3ghgJ|5e-04|28.1|96/186| RP:PFM:NREP 1 RP:PFM:REP 45->134|PF07888|2e-05|25.6|90/387|CALCOCO1| HM:PFM:NREP 2 HM:PFM:REP 7->65|PF06667|0.0001|25.4|59/75|PspB| HM:PFM:REP 47->133|PF01576|3.4e-06|19.5|87/859|Myosin_tail_1| RP:SCP:NREP 1 RP:SCP:REP 47->123|3dbyA2|4e-04|17.3|75/135|a.29.13.1| HM:SCP:REP 30->140|1c1gC_|0.00025|18.0|111/0|h.1.5.1|1/1|Tropomyosin| OP:NHOMO 3 OP:NHOMOORG 2 OP:PATTERN ------------------21------------------------------------------------ --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 96 STR:RPRED 62.7 SQ:SECSTR ##################################HHHHHHHHHHHHHHHHHH###HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH#################### DISOP:02AL 53-53,59-59,62-62,67-67,95-95,101-101,104-104,109-109,123-123,137-137,143-144,146-146| PSIPRED ccHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccc //