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Pyrobaculum aerophilum str. IM2 (paer1)
Gene : AAL64428.1
DDBJ      :             type II secretion system protein, conjectural
Swiss-Prot:             

Homologs  Archaea  65/68 : Bacteria  577/915 : Eukaryota  4/199 : Viruses  0/175   --->[See Alignment]
c.37.1
:289 amino acids
:PSIPRED
:DISOPRED
:BLT:PDB   2->216 2oap1 PDBj 4e-40 44.8 %
:RPS:PDB   24->83 3czpA PDBj 9e-07 16.7 %
:RPS:PDB   58->217 1dmaB PDBj 1e-19 13.6 %
:RPS:SCOP  1->165 1p9rA  c.37.1.11 * 1e-28 29.9 %
:HMM:SCOP  2->270 1p9rA_ c.37.1.11 * 5.9e-35 27.8 %
:RPS:PFM   1->155 PF00437 * GSPII_E 2e-18 40.5 %
:HMM:PFM   2->157 PF00437 * GSPII_E 3.8e-40 36.7 150/282  
:BLT:SWISS 14->231 Y1287_METJA 3e-44 43.0 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID AAL64428.1 GT:GENE AAL64428.1 GT:PRODUCT type II secretion system protein, conjectural GT:DATABASE GIB00076CH01 GT:ORG paer1 GB:ACCESSION GIB00076CH01 GB:LOCATION 1646026..1646895 GB:FROM 1646026 GB:TO 1646895 GB:DIRECTION + GB:PRODUCT type II secretion system protein, conjectural GB:NOTE Protein fate; Protein and peptide secretion and trafficking GB:PROTEIN_ID AAL64428.1 GB:DB_XREF GI:18161123 LENGTH 289 SQ:AASEQ MIRKYFVVPITLIDMVKMGTISSDAVAYLWLMLDYGRNIVIVGPTGAGKTTLLNALLYLVRLEAKILTIEDTREINIVHEHWQALVTRPSRSEGVRDVSAFDLLAVAMRSRPDYVVVGEVRGEEAYVLFQAFGSGHSGATTIHAETIEDAIRRLLTRPMNVPPMLVGLAHIFIRIMRVKVGNQIVRRVVEIAENMGVSRGGRPRLHYVYRWNPERDMMEQLEESRHLETISRTRFVPLDQLKRELERRRELISLMVERGFSTPYVVAKIFTMYHLDPDRAIEAVRTGKI GT:EXON 1|1-289:0| BL:SWS:NREP 1 BL:SWS:REP 14->231|Y1287_METJA|3e-44|43.0|214/270| SEG 241->251|lkrelerrrel| BL:PDB:NREP 1 BL:PDB:REP 2->216|2oap1|4e-40|44.8|201/481| RP:PDB:NREP 2 RP:PDB:REP 24->83|3czpA|9e-07|16.7|60/460| RP:PDB:REP 58->217|1dmaB|1e-19|13.6|147/189| RP:PFM:NREP 1 RP:PFM:REP 1->155|PF00437|2e-18|40.5|148/273|GSPII_E| HM:PFM:NREP 1 HM:PFM:REP 2->157|PF00437|3.8e-40|36.7|150/282|GSPII_E| GO:PFM:NREP 3 GO:PFM GO:0005524|"GO:ATP binding"|PF00437|IPR001482| GO:PFM GO:0005622|"GO:intracellular"|PF00437|IPR001482| GO:PFM GO:0006810|"GO:transport"|PF00437|IPR001482| RP:SCP:NREP 1 RP:SCP:REP 1->165|1p9rA|1e-28|29.9|157/378|c.37.1.11| HM:SCP:REP 2->270|1p9rA_|5.9e-35|27.8|248/401|c.37.1.11|1/1|P-loop containing nucleoside triphosphate hydrolases| OP:NHOMO 1383 OP:NHOMOORG 646 OP:PATTERN 332123434444443323332224533413641113322222562224-663512222222-22121- 4251511111111--1111-11--111111111111111132343212423-44322-22117111134221---111114--11---------------------------------------111---1121--434551112111121111111-1112-1-112221----1-1---1-322111112---2-22-1--111-1-----1-1----1---2------22------------------------11-----11--1-1-111-------------------------11--11-11111-1--11----11-11------1--1-2222-1--1-2--2234131333-31111212---2136336-4223112173133211211111111114-1111232257514446735545531422331-1211221--------353--1-111111111111111111111111111111-2462-133155333361133233734444343562346--5544433355524411614542122212222213255-124111-12111-31422113343232112-1312--2--21-2232314-1-1-23441-13211122223221232223223234--12224------21-3--311111111-1-111---2---111--1---23332--1-----1---1------1-1-----1-322332222322--71-----111222311222-112----1--111221-311-13122121121---11222---------43545333234556632322221111112------1111---------------------------------------1-1-111-3- -------------------------------------------------------------------------------------------------------------------------------------------------------------------2------4-----------------1-----1---- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- DISOP:02AL 288-289| PSIPRED cccccccccccHHHHHHccccHHHHHHHHHHHHHcccEEEEEccccccHHHHHHHHHHHcccccEEEEEEcccEEEEccccEEEEEEEcccccccccccHHHHHHHHHHccccEEEEEccccHHHHHHHHHHHccccEEEEEEcccHHHHHHHHHccccccHHHHHHHHHHHHHHHHHEEcccccEEEEEEEEEEEccccccEEEEEEEEEccccccEEEcccHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHcccHHHHHHHHHcccc //