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Pyrobaculum aerophilum str. IM2 (paer1)
Gene : AAL64464.1
DDBJ      :             polyferredoxin
Swiss-Prot:             

Homologs  Archaea  33/68 : Bacteria  59/915 : Eukaryota  0/199 : Viruses  0/175   --->[See Alignment]
d.58.1
:370 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   80->132 1hfeL PDBj 1e-08 46.2 %
:BLT:PDB   255->299 1fcaA PDBj 9e-08 44.4 %
:RPS:PDB   81->134 1durA PDBj 6e-10 40.4 %
:RPS:PDB   253->306 1durA PDBj 6e-07 31.5 %
:RPS:SCOP  77->134 1hfeL2  d.58.1.5 * 2e-10 37.9 %
:RPS:SCOP  255->306 1durA  d.58.1.1 * 6e-09 34.6 %
:HMM:SCOP  81->346 1q16B_ d.58.1.5 * 8.6e-29 38.5 %
:HMM:PFM   80->103 PF00037 * Fer4 6.3e-09 62.5 24/24  
:HMM:PFM   111->132 PF00037 * Fer4 9.2e-09 50.0 22/24  
:HMM:PFM   253->274 PF00037 * Fer4 5.7e-10 50.0 22/24  
:HMM:PFM   285->302 PF00037 * Fer4 5.5e-07 50.0 18/24  
:BLT:SWISS 77->347 Y1303_METJA 3e-15 29.7 %
:PROS 87->98|PS00198|4FE4S_FER_1
:PROS 117->128|PS00198|4FE4S_FER_1
:PROS 259->270|PS00198|4FE4S_FER_1
:PROS 288->299|PS00198|4FE4S_FER_1
:TM
:REPEAT 4|87->109|117->142|259->280|288->319

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID AAL64464.1 GT:GENE AAL64464.1 GT:PRODUCT polyferredoxin GT:DATABASE GIB00076CH01 GT:ORG paer1 GB:ACCESSION GIB00076CH01 GB:LOCATION complement(1670018..1671130) GB:FROM 1670018 GB:TO 1671130 GB:DIRECTION - GB:PRODUCT polyferredoxin GB:NOTE Energy metabolism; Electron transport GB:PROTEIN_ID AAL64464.1 GB:DB_XREF GI:18161161 LENGTH 370 SQ:AASEQ MIRRDKPSVIVVAGRENITRYSSQTPLYFAYRGSYADWFKAVAEKYAELVDWTPLPPAEAREATRRDFLTGGFIRLRDTVVIDQSKCIWCGLCADYCPASAIEYVERKNVKVKYESCIDCGLCNSVCPVDAVKMPSLPDGYIADLVKTSRQPLKFICDYAFEDGDEEGVRVKCIAAIPKQYLYLAAAKHGTAYAHCSRGERCPLWSAVEKWAEGVKREGREFIITAARAQLEPGDKWQTRMLAVAIGMPTGVVKIREGCTLCGACVNACPTDALSVRGYELRLVPALCIACGVCVAKCPEGVMDVERKAVERPYESAALFRDSPAKCASCGKELTYTVTMAKKLAERLKERGLPYSHVYLCENCRFTSQA GT:EXON 1|1-370:0| BL:SWS:NREP 1 BL:SWS:REP 77->347|Y1303_METJA|3e-15|29.7|239/501| PROS 87->98|PS00198|4FE4S_FER_1|PDOC00176| PROS 117->128|PS00198|4FE4S_FER_1|PDOC00176| PROS 259->270|PS00198|4FE4S_FER_1|PDOC00176| PROS 288->299|PS00198|4FE4S_FER_1|PDOC00176| TM:NTM 2 TM:REGION 241->263| TM:REGION 279->301| NREPEAT 1 REPEAT 4|87->109|117->142|259->280|288->319| BL:PDB:NREP 2 BL:PDB:REP 80->132|1hfeL|1e-08|46.2|52/396| BL:PDB:REP 255->299|1fcaA|9e-08|44.4|45/55| RP:PDB:NREP 2 RP:PDB:REP 81->134|1durA|6e-10|40.4|52/55| RP:PDB:REP 253->306|1durA|6e-07|31.5|53/55| HM:PFM:NREP 4 HM:PFM:REP 80->103|PF00037|6.3e-09|62.5|24/24|Fer4| HM:PFM:REP 111->132|PF00037|9.2e-09|50.0|22/24|Fer4| HM:PFM:REP 253->274|PF00037|5.7e-10|50.0|22/24|Fer4| HM:PFM:REP 285->302|PF00037|5.5e-07|50.0|18/24|Fer4| RP:SCP:NREP 2 RP:SCP:REP 77->134|1hfeL2|2e-10|37.9|58/85|d.58.1.5| RP:SCP:REP 255->306|1durA|6e-09|34.6|51/55|d.58.1.1| HM:SCP:REP 81->346|1q16B_|8.6e-29|38.5|143/509|d.58.1.5|1/1|4Fe-4S ferredoxins| OP:NHOMO 113 OP:NHOMOORG 92 OP:PATTERN --1-11--2222221-31222221-------11-421-11121---12--1--1---1---------- -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------11------------------------------------------------------------------------------------------------------------------------------------------1---------------------------------1-------------------------1--1-------------------111111111---------------------------1---------------1-----------------------------------------1---------------------------1-111-11-11-1121-11-----------------11-----1-------------------------1-1-----------1-------12-----1----------------1-------11-1-----1-----------------------------------------------------------------------------------------------------------1-------------------------------------------------------111111111--111------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 313 STR:RPRED 84.6 SQ:SECSTR ###################TTccccccccccHHHHHHHHHHHHHHHHHHTTcTTcHHHHHHHHHHHHHH####cccEEcEEEEcTTcccccccGGGcTTccEEcccccccEEcTTTcccccHHHHHcTTccEEEcTTccccGGcEE##########GGccccTTccHHHHHHHHHHH#HHHHTTcccccTT####cTTTTccHHHHHHHHHTc###ccccccc#########cccGGGcccccEEEE####EEEEcTTcccccccGGGcTTccEEccccEcEEcTTTcccccHHHHHcTTccEEEcTTccccHHHHHHHHHHHHccccccEEEHTTcHHHHHHHHHHHHHTTcTTcEEE#EccHHHHH## DISOP:02AL 1-2| PSIPRED ccccccccEEEEEcccccccccHHHHccHHHccccHHHHHHHccccHHHcccccccHHHHHHHHHHHHHcccccccccEEEEcccccccccccHHHccccEEEEEcccEEEEcccccccccccHHHccccEEEEEEccccEEEEccccccccEEEEEEcccHHHHHHcccccHHHHccccHHHHHHHHHHHHHHHEEEcccccccccHHHHHHEEEccccEEEcccccccccccHHHccccccccccccEEEEEEcccccccccHHHHcccccEEEcccEEEEEHHHcccccccHHHcccccEEEEEccccccHHHHHHHHHccHHHHHccccccccHHHHHHHHHHHHHccccHHHEEEccccEEEEcc //